RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 TMEM225Q6GV28 225 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NIPAL3Q6P499 406 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 GPR149Q86SP6 731 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM150AQ86TG1 271 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SLC2A13Q96QE2 648 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 LOC285095A0A1B0GVY8 99 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 FUOMA2VDF0 154 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 A6NIZ1 184 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 EFCAB7A8K855 629 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 F7P08709 466 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 C1GALT1C1LP0DN25 315 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OSMP13725 252 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 VEGFCP49767 419 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RAP1BP61224 184 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RAP1AP62834 184 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NKX3-2P78367 333 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 MRPS10P82664 201 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 KIAA0319Q5VV43 1072 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SPRYD7Q5W111 196 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 KCNIP4Q6PIL6 250 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 THADAQ6YHU6 1953 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF704Q6ZNC4 412 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 MAMDC2Q7Z304 686 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF619Q8N2I2 560 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM151AQ8N4L1 468 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 DAZLQ92904 295 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RAB8BQ92930 207 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TXLNGYQ9BZA5 131 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RPS10P5Q9NQ39 176 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SCAF4O95104 1147 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 GALTP07902 379 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CA5AP35218 305 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 GMPRP36959 345 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RGS6P49758 472 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 MFSD13AQ14CX5 517 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 DESI1Q6ICB0 168 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SGPP2Q8IWX5 399 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SPRYD4Q8WW59 207 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TWNKQ96RR1 684 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 PELI2Q9HAT8 420 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 LUZP4Q9P127 313 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TMEM98Q9Y2Y6 226 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SLC6A5Q9Y345 797 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TIMM8BQ9Y5J9 83 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 KRBA1A5PL33 1030 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OR5K4A6NMS3 321 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 ARPC5O15511 151 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CFHP08603 1231 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CD79BP40259 229 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 TAP2Q03519 686 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 PLCXD2Q0VAA5 305 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 C2orf27AQ580R0 203 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NAXEQ8NCW5 288 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RTP4Q96DX8 246 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OR2M2Q96R28 347 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 DPH2Q9BQC3 489 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 ZNF442Q9H7R0 627 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 IGSF5Q9NSI5 407 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 DCAF13Q9NV06 445 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 PCTPQ9UKL6 214 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NDRG2Q9UN36 371 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 BACE2Q9Y5Z0 518 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OR6C6A6NF89 314 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SHOXO15266 292 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OIP5O43482 229 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 BRINP1O60477 761 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 MTX2O75431 263 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SPDEFO95238 335 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 ELNP15502 786 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 HNF1BP35680 557 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 ETV6P41212 452 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RPS26P62854 115 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CDK5R2Q13319 367 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 UAP1L1Q3KQV9 507 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 METAP1DQ6UB28 335 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 SBSNQ6UWP8 590 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CFAP77Q6ZQR2 320 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RPS27LQ71UM5 84 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CSNK1A1LQ8N752 337 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OR52E2Q8NGJ4 325 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 OR5L2Q8NGL0 311 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NANOS1Q8WY41 292 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 HAS2Q92819 552 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 PTERQ96BW5 349 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NSUN5Q96P11 429 aaKnown RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 PTGDR2Q9Y5Y4 395 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 APC2O95996 2303 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 PLXND1Q9Y4D7 1925 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 H7BY64 318 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 NPC1O15118 1278 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CRTAPO75718 401 aaPredicted RBP4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CCNOP22674 350 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 DIO3P55073 304 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CREB5Q02930 508 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 MLC1Q15049 377 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 CYP27C1Q4G0S4 372 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 AUTS2Q8WXX7 1259 aa4.56□□□□□ -1.68
RC3H1-201ENST00000258349 RRNAD1Q96FB5 475 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms