RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 MFSD9Q8NBP5 474 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 GGHQ92820 318 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 ELP4Q96EB1 424 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 CITED4Q96RK1 184 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 SLC9A8Q9Y2E8 581 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 WDFY3Q8IZQ1 3526 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 RECKO95980 971 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 ALAS2P22557 587 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 TLX1P31314 330 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 KHKP50053 298 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 RGS8P57771 180 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 OR2B6P58173 313 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 CDC42P60953 191 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 ABATP80404 500 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 DOC2BQ14184 412 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 CDC73Q6P1J9 531 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 FAHD1Q6P587 224 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 PRR23CQ6ZRP0 262 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 USP53Q70EK8 1073 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 SRFBP1Q8NEF9 429 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 OR4K14Q8NGD5 310 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 TMEM203Q969S6 136 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 TBC1D20Q96BZ9 403 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 CNPPD1Q9BV87 410 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 CCNB1IP1Q9NPC3 277 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 POFUT2Q9Y2G5 429 aa13.71□□□□□ -0.21
TRAFD1-201ENST00000257604 CACNA1EQ15878 2313 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 CENPVL1A0A0U1RR11 272 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 A8MUA0 341 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 LOC110117498-PIK3R3F6TDL0 507 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 CCRL2O00421 344 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 OR10H2O60403 315 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 SDHBP21912 280 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 UGT2B15P54855 530 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 CCINQ13939 588 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 IRF3Q14653 427 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 SUZ12Q15022 739 aaKnown RBP13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 CASP12Q6UXS9 341 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 PAQR7Q86WK9 346 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 OR4K5Q8NGD3 323 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 ZDHHC1Q8WTX9 485 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 ZFYVE21Q9BQ24 234 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 BCL7BQ9BQE9 202 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 EGLN3Q9H6Z9 239 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 SYNDIG1Q9H7V2 258 aa13.71□□□□□ -0.22
TRAFD1-201ENST00000257604 FANCMQ8IYD8 2048 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ATG2AQ2TAZ0 1938 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 PRICKLE3O43900 615 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 MED26O95402 600 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 CCNYL3P0C7X3 344 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 GPR4P46093 362 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 CXCR4P61073 352 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 TSTQ16762 297 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 SPANXN2Q5MJ10 180 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 PRAMEF17Q5VTA0 474 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 FCRL6Q6DN72 434 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 SMARCD3Q6STE5 483 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 USP30Q70CQ3 517 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC34A3Q8N130 599 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 GHDCQ8N2G8 530 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 WDR36Q8NI36 951 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 PEX11GQ96HA9 241 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 TGM7Q96PF1 710 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 SPATA9Q9BWV2 254 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 MALT1Q9UDY8 824 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 RP1P56715 2156 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 GPR179Q6PRD1 2367 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ISPDA4D126 451 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 PDE9AO76083 593 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 RPLP0P05388 317 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 FUT1P19526 365 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ELAVL4P26378 380 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 CSNK1EP49674 416 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 GAS6Q14393 721 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ZNF425Q6IV72 752 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ZNF730Q6ZMV8 503 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 Q7L0L9 218 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 KIAA1958Q8N8K9 716 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 B3GNT7Q8NFL0 401 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 IL17RDQ8NFM7 739 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 SLC22A18Q96BI1 424 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 FAM46AQ96IP4 442 aaKnown RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 HRASLS5Q96KN8 279 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ZNF354BQ96LW1 612 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 OR2A5Q96R48 311 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 PAQR5Q9NXK6 330 aaPredicted RBP13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 ZNF221Q9UK13 617 aa13.7□□□□□ -0.22
TRAFD1-201ENST00000257604 FGF17O60258 216 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 APOA1P02647 267 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 ADRA2AP08913 450 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 PCSK2P16519 638 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 NDUFS1P28331 727 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 AHRP35869 848 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 GGT2P36268 569 aa13.69□□□□□ -0.22
TRAFD1-201ENST00000257604 KCNJ5P48544 419 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms