RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DNAJC5GQ8N7S2 189 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 LILRB4Q8NHJ6 448 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 SPATA5L1Q9BVQ7 753 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 TEX12Q9BXU0 123 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 OR2B2Q9GZK3 357 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 IRF2BPLQ9H1B7 796 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 C3orf14Q9HBI5 128 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 SLC7A7Q9UM01 511 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 BTN3A3O00478 584 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 ARHGEF9O43307 516 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 PDX1P52945 283 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 ENTPD8Q5MY95 495 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 RPTNQ6XPR3 784 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 TP53I13Q8NBR0 393 aaPredicted RBP12.67□□□□□ -0.38
VHL-201ENST00000256474 PIGKQ92643 395 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 CDS1Q92903 461 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 ATP13A2Q9NQ11 1180 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 TNFRSF10DQ9UBN6 386 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 KCND3Q9UK17 655 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
VHL-201ENST00000256474 A0A075B6Q4 140 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 EDDM13A0A1B0GTR0 161 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 C12orf71A8MTZ7 269 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 J3QLW9 94 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 PRODHO43272 600 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 GMFGO60234 142 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 ZNF19P17023 458 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 SLC1A3P43003 542 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 HYAL2Q12891 473 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 ZSWIM7Q19AV6 140 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 BTBD16Q32M84 506 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3GQ6DHY5 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3CQ6IPX1 549 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TBC1D3Q8IZP1 549 aaPredicted RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 C19orf43Q9BQ61 176 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 MAN2C1Q9NTJ4 1040 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 DKK3Q9UBP4 350 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 NOTCH4Q99466 2003 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 LRIT2A6NDA9 550 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 POLR1CO15160 346 aaPredicted RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 UBXN7O94888 489 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 PRKAR1AP10644 381 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 PRR5P85299 388 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 NNATQ16517 81 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 VWA5B2Q8N398 1253 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 SAMD12Q8N8I0 201 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 SLC7A6Q92536 515 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 AP3S1Q92572 193 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 CAMK1GQ96NX5 476 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 POLDIP3Q9BY77 421 aaKnown RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 USP36Q9P275 1121 aaKnown RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 DIMT1Q9UNQ2 313 aaKnown RBP12.66□□□□□ -0.38
VHL-201ENST00000256474 ALG5Q9Y673 324 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 PSMD9O00233 223 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 HTR2BP41595 481 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 OR52E1Q8NGJ3 308 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 TMEM163Q8TC26 289 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 CHFRQ96EP1 664 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 PRRC1Q96M27 445 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 INSL6Q9Y581 213 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 PCDHGB2Q9Y5G2 931 aa12.66□□□□□ -0.38
VHL-201ENST00000256474 A0A0B4J203 849 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 NOTOA8MTQ0 251 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 MEN1O00255 615 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 GABRPO00591 440 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 EPPINO95925 133 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 PRG2P13727 222 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 HIST1H1TP22492 207 aaPredicted RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 MPIP34949 423 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 HCCSP53701 268 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 EPHA5P54756 1037 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 PCBP4P57723 403 aaKnown RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 TRAM2Q15035 370 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 CDC73Q6P1J9 531 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 LYPD8Q6UX82 237 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 IZUMO1Q8IYV9 350 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 BEST4Q8NFU0 473 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 IFT27Q9BW83 186 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 WDR45Q9Y484 360 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 HEATR5BQ9P2D3 2071 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 A0A0G2JMP0 313 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 CENPVL1A0A0U1RR11 272 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 A0A0X1KG70 313 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 A0A1W2PRG6 482 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 PLA2G10O15496 165 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 EEF1E1O43324 174 aaKnown RBP12.65□□□□□ -0.38
VHL-201ENST00000256474 VEGFDO43915 354 aa12.65□□□□□ -0.38
VHL-201ENST00000256474 LDB3O75112 727 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms