RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DCTN2Q13561 401 aaKnown RBP17.58■□□□□ 0.4
TRIM47-201ENST00000254816 PRAMEF8Q5VWM4 474 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 PRAMEF7Q5VXH5 474 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 TYW3Q6IPR3 259 aaKnown RBP17.58■□□□□ 0.4
TRIM47-201ENST00000254816 TCTN3Q6NUS6 607 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 FIGNL1Q6PIW4 674 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 ATG16L2Q8NAA4 619 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 TSLPQ969D9 159 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 NRBF2Q96F24 287 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 SDF2Q99470 211 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 PAK1IP1Q9NWT1 392 aaPredicted RBP17.58■□□□□ 0.4
TRIM47-201ENST00000254816 CALML5Q9NZT1 146 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 KIF17Q9P2E2 1029 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 DTX4Q9Y2E6 619 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 CENPVL1A0A0U1RR11 272 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 A8MUA0 341 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 FRS3O43559 492 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 AGR2O95994 175 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 ANKRD34CP0C6C1 535 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 IL5RAQ01344 420 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 GPR68Q15743 365 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 DCST2Q5T1A1 773 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 PHF19Q5T6S3 580 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 ARHGAP40Q5TG30 622 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 KDM4DQ6B0I6 523 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 COX18Q8N8Q8 333 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 CNDP2Q96KP4 475 aaKnown RBP17.58■□□□□ 0.4
TRIM47-201ENST00000254816 TUBA1CQ9BQE3 449 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 SLC7A5P2Q9GIP4 190 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 RLIMQ9NVW2 624 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 ERVK-19Q9WJR5 959 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 WDR45Q9Y484 360 aa17.58■□□□□ 0.4
TRIM47-201ENST00000254816 NPIPA5A0A0B4J1W7 369 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 A0A1B0GX78 115 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 NPIPA7E9PJI5 369 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 SLC1A7O00341 560 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 GADD45GO95257 159 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 LGI1O95970 557 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 NPIPA8P0DM63 369 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 TNNI3P19429 210 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 MAP3K8P41279 467 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 EMDP50402 254 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 RNF144AP50876 292 aaPredicted RBP17.57■□□□□ 0.4
TRIM47-201ENST00000254816 FOXL2P58012 376 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 DSG2Q14126 1118 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 BMP8AQ7Z5Y6 402 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 ZBTB46Q86UZ6 589 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 PIK3C3Q8NEB9 887 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 OR6T1Q8NGN1 323 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 GFM1Q96RP9 751 aaKnown RBP17.57■□□□□ 0.4
TRIM47-201ENST00000254816 PINK1Q9BXM7 581 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 DGCR6LQ9BY27 220 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 FOLH1BQ9HBA9 442 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 CTPS2Q9NRF8 586 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 GPR55Q9Y2T6 319 aaPredicted RBP17.57■□□□□ 0.4
TRIM47-201ENST00000254816 CHST2Q9Y4C5 530 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 WDFY3Q8IZQ1 3526 aa17.57■□□□□ 0.4
TRIM47-201ENST00000254816 hCG_2014768A0A024R1R8 64 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 CLDN24A6NM45 220 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 KHNYNO15037 678 aaKnown RBP17.56■□□□□ 0.4
TRIM47-201ENST00000254816 XPNPEP2O43895 674 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 SEC14L2O76054 403 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 JUNBP17275 347 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-201ENST00000254816 RFX3P48380 749 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 ENTPD1P49961 510 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 ACY1Q03154 408 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 SLC38A9Q8NBW4 561 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 OR52P1PQ8NH57 321 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 GIPC3Q8TF64 312 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 PRR14Q9BWN1 585 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 DUSP22Q9NRW4 184 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 PNO1Q9NRX1 252 aaKnown RBP17.56■□□□□ 0.4
TRIM47-201ENST00000254816 SLC16A6O15403 523 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 NOL3O60936 208 aaKnown RBP17.56■□□□□ 0.4
TRIM47-201ENST00000254816 COQ9O75208 318 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 ZCCHC12Q6PEW1 402 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 TSPYL5Q86VY4 417 aaPredicted RBP17.56■□□□□ 0.4
TRIM47-201ENST00000254816 TMEM151BQ8IW70 566 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 SLC5A8Q8N695 610 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 OR10G2Q8NGC3 310 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 OR4N2Q8NGD1 307 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 OR9Q2Q8NGE9 314 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 STACQ99469 402 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 FEVQ99581 238 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 CCDC90BQ9GZT6 254 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 APMAPQ9HDC9 416 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 KRT84Q9NSB2 600 aa17.56■□□□□ 0.4
TRIM47-201ENST00000254816 GDF9O60383 454 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 IFI6P09912 130 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 ITGAMP11215 1152 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 FMO3P31513 532 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 CLK3P49761 638 aaKnown RBP17.55■□□□□ 0.4
TRIM47-201ENST00000254816 PSG6Q00889 435 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 CDK5R2Q13319 367 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 PIN1Q13526 163 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-201ENST00000254816 MICAQ29983 383 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 RFX4Q33E94 735 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 FAHD1Q6P587 224 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 DHRS4L2Q6PKH6 230 aa17.55■□□□□ 0.4
TRIM47-201ENST00000254816 SHISA6Q6ZSJ9 500 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms