RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RNF6Q9Y252 685 aa20.92■□□□□ 0.94
LSM4-201ENST00000252816 PHF3Q92576 2039 aaKnown RBP20.92■□□□□ 0.94
LSM4-201ENST00000252816 C19orf84I3L1E1 186 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 EMC8O43402 210 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 IL33O95760 270 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 IGKV1D-16P01601 117 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 DDX5P17844 614 aaKnown RBP20.91■□□□□ 0.94
LSM4-201ENST00000252816 PRPS1L1P21108 318 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 EVI2BP34910 448 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 SLC18A1P54219 525 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 DIO3P55073 304 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 MRPS22P82650 360 aaKnown RBP20.91■□□□□ 0.94
LSM4-201ENST00000252816 DECR1Q16698 335 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 SMU1Q2TAY7 513 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 C1orf185Q5T7R7 199 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 OR5M10Q6IEU7 315 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 B3GNT6Q6ZMB0 384 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 SZRD1Q7Z422 152 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 PLCZ1Q86YW0 608 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 CEP70Q8NHQ1 597 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 PIK3R3Q92569 461 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 NUF2Q9BZD4 464 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 NOP53Q9NZM5 478 aaKnown RBP20.91■□□□□ 0.94
LSM4-201ENST00000252816 FBXL2Q9UKC9 423 aa20.91■□□□□ 0.94
LSM4-201ENST00000252816 CACNA1DQ01668 2161 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 MED12Q93074 2177 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 A0A1W2PRB8 838 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 TTC36A6NLP5 189 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 FADS1O60427 444 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 CBR3O75828 277 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 NKX2-2O95096 273 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 ACP2P11117 423 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 RFX3P48380 749 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 CLDN8P56748 225 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 MAD2L1Q13257 205 aaPredicted RBP20.9■□□□□ 0.94
LSM4-201ENST00000252816 NHSL2Q5HYW2 709 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 DCST1Q5T197 706 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 VASNQ6EMK4 673 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 ACAD11Q709F0 780 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 ULK2Q8IYT8 1036 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 CDRT4Q8N9R6 151 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 FBXO30Q8TB52 745 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 GPR151Q8TDV0 419 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 CA5BP1Q8WTZ4 195 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 FAM120BQ96EK7 910 aaKnown RBP20.9■□□□□ 0.94
LSM4-201ENST00000252816 RMND5BQ96G75 393 aaPredicted RBP20.9■□□□□ 0.94
LSM4-201ENST00000252816 C16orf58Q96GQ5 468 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 MS4A4EQ96PG1 132 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 UGT2B28Q9BY64 529 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 RTN4RQ9BZR6 473 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 OR2B2Q9GZK3 357 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 C3orf14Q9HBI5 128 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 CHST11Q9NPF2 352 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 PCDHGB3Q9Y5G1 929 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 TEX15Q9BXT5 2789 aa20.9■□□□□ 0.94
LSM4-201ENST00000252816 SCO2O43819 266 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 GABRA1P14867 456 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 BMP7P18075 431 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 ADH7P40394 386 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 C21orf58P58505 322 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 EXOSC6Q5RKV6 272 aaKnown RBP20.89■□□□□ 0.93
LSM4-201ENST00000252816 MFSD12Q6NUT3 480 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 SLC16A11Q8NCK7 471 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 OR5P2Q8WZ92 322 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 SLC9A6Q92581 669 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 MARVELD3Q96A59 401 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 ATAD3AQ9NVI7 634 aa20.89■□□□□ 0.93
LSM4-201ENST00000252816 KDM4EB2RXH2 506 aaPredicted RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 HNRNPRO43390 633 aaKnown RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 SNNO75324 88 aaPredicted RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 C6orf47O95873 294 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 HOXD4P09016 255 aaPredicted RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 CHRNB4P30926 498 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 DUSP5Q16690 384 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 VPS26BQ4G0F5 336 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 GALNT10Q86SR1 603 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 KIRREL3Q8IZU9 778 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 LILRB4Q8NHJ6 448 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 PSMA8Q8TAA3 256 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 ASB5Q8WWX0 329 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 ARL8AQ96BM9 186 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 OTUB1Q96FW1 271 aaPredicted RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 PRPF18Q99633 342 aaKnown RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 YIPF4Q9BSR8 244 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 BHLHE41Q9C0J9 482 aaPredicted RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 PRDM14Q9GZV8 571 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 CXorf36Q9H7Y0 433 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 MEAF6Q9HAF1 191 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 ZCCHC3Q9NUD5 404 aaKnown RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 NKIRAS1Q9NYS0 192 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 MRTO4Q9UKD2 239 aaKnown RBP20.88■□□□□ 0.93
LSM4-201ENST00000252816 ABCG2Q9UNQ0 655 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 SNX8Q9Y5X2 465 aa20.88■□□□□ 0.93
LSM4-201ENST00000252816 A0A0G2JNJ9 132 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 KCNH1O95259 989 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 UTS2O95399 124 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 KIR3DL1P43629 444 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 PRR5P85299 388 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 SEM1Q6ZVN7 128 aa20.87■□□□□ 0.93
LSM4-201ENST00000252816 CAMKMTQ7Z624 323 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms