RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 WFIKKN1Q96NZ8 548 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CENPKQ9BS16 269 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SFXN3Q9BWM7 321 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 ANGPTL4Q9BY76 406 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 METTL7AQ9H8H3 244 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TNFRSF12AQ9NP84 129 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SERHLQ9NQF3 203 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TIMM22Q9Y584 194 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 ATRQ13535 2644 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SERTM1A2A2V5 107 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TRPC5OSA6NMA1 111 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 RNF212BA8MTL3 300 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 CAPN14A8MX76 684 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SLC28A1O00337 649 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 FOXE1O00358 373 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SNX4O95219 450 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 KITP10721 976 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 PTPN6P29350 595 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 IMPG1Q17R60 797 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 NHSL2Q5HYW2 709 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 KHDRBS2Q5VWX1 349 aaKnown RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 ZNF550Q7Z398 422 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 DDIASQ8IXT1 998 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 ST13P4Q8IZP2 240 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 GBP7Q8N8V2 638 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 MAPK1IP1LQ8NDC0 245 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 OR1J4Q8NGS1 313 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 OR14L1PQ8NHC6 308 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 HUS1BQ8NHY5 278 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 TANKQ92844 425 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 PIP5K1AQ99755 562 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SIKE1Q9BRV8 207 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 GALNT9Q9HCQ5 603 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 PNPOQ9NVS9 261 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 NMRK1Q9NWW6 199 aa12.53□□□□□ -0.4
DDX39A-201ENST00000242776 MARCOQ9UEW3 520 aaPredicted RBP12.53□□□□□ -0.4
DDX39A-201ENST00000242776 SONP18583 2426 aaKnown RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 ANKRD33BA6NCL7 494 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 DEFB108AA8MXU0 73 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 TMEM233B4DJY2 109 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 HDAC3O15379 428 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 RCBTB2O95199 551 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 TGDSO95455 350 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 PDYNP01213 254 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 CT62P0C5K7 136 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 TLX1P31314 330 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 DIO3P55073 304 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 RPS13P62277 151 aaKnown RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 PDCD2Q16342 344 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 TMEM35AQ53FP2 167 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 SGO1Q5FBB7 561 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 TCHHL1Q5QJ38 904 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 LRRC34Q8IZ02 419 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 CNEP1R1Q8N9A8 125 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 ZPLD1Q8TCW7 415 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 CMTM7Q96FZ5 175 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 ZNF317Q96PQ6 595 aaPredicted RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 MTERF1Q99551 399 aaKnown RBP12.52□□□□□ -0.41
DDX39A-201ENST00000242776 SERPINI1Q99574 410 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 TM9SF2Q99805 663 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 MED18Q9BUE0 208 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 FGFR1OP2Q9NVK5 253 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 PSD3Q9NYI0 1048 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 EHD3Q9NZN3 535 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 DNAJC15Q9Y5T4 150 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 USH1CQ9Y6N9 552 aa12.52□□□□□ -0.41
DDX39A-201ENST00000242776 USF3Q68DE3 2245 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 RAI1Q7Z5J4 1906 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-201ENST00000242776 GMNCA6NCL1 334 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 OR6C76A6NM76 312 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 A8MXE2 369 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 PLPP1O14494 284 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 PIP5K1BO14986 540 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 RGS14O43566 566 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 SCELO95171 688 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 GPR75O95800 540 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 ACTL6AO96019 429 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 GBAP04062 536 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 FPR1P21462 350 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 PTX3P26022 381 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-201ENST00000242776 GCKP35557 465 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 PTH2RP49190 550 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 HTR6P50406 440 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 NRG3P56975 720 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 SIRPAP78324 504 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 SPRED3Q2MJR0 410 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 UGT3A2Q3SY77 523 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 ANKRD34AQ69YU3 496 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 TIGD3Q6B0B8 471 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 PRSS57Q6UWY2 283 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 P4HA3Q7Z4N8 544 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 GRAMD2AQ8IUY3 354 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 RGMAQ96B86 450 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 TMEM41AQ96HV5 264 aa12.51□□□□□ -0.41
DDX39A-201ENST00000242776 OPN3Q9H1Y3 402 aaPredicted RBP12.51□□□□□ -0.41
DDX39A-201ENST00000242776 MS4A12Q9NXJ0 267 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms