RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 PLSCR4Q9NRQ2 329 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 ADAM29Q9UKF5 820 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 CES1P1Q9UKY3 287 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 PSME2Q9UL46 239 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 KCNS2Q9ULS6 477 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 SNX12Q9UMY4 172 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 GPR55Q9Y2T6 319 aaPredicted RBP7.47□□□□□ -1.21
IFT43-201ENST00000238628 ZNF337Q9Y3M9 751 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 PCDHA9Q9Y5H5 950 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 TENM1Q9UKZ4 2725 aa7.47□□□□□ -1.21
IFT43-201ENST00000238628 H0YC42 278 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 H3BML4 177 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 LINC01387J3KSC0 135 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 TP73O15350 636 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 TSPAN2O60636 221 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 BCAS2O75934 225 aaPredicted RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 CRABP2P29373 138 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 IL12BP29460 328 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 MAPK12P53778 367 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 PNLIPRP2P54317 469 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 ALDH18A1P54886 795 aaKnown RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 TPD52P55327 224 aaPredicted RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 RPS3AP61247 264 aaKnown RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 MRPS35P82673 323 aaKnown RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 PON3Q15166 354 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 RAET1LQ5VY80 246 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 TTC19Q6DKK2 380 aaPredicted RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 FAM180BQ6P0A1 224 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 C3orf62Q6ZUJ4 267 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 CYS1Q717R9 158 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 LARP4Q71RC2 724 aaKnown RBP eCLIP7.46□□□□□ -1.22
IFT43-201ENST00000238628 FAM214BQ7L5A3 538 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 GOLGA7Q7Z5G4 137 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 MILR1Q7Z6M3 343 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 CMC1Q7Z7K0 106 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 OR5M1Q8NGP8 315 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 RHEBL1Q8TAI7 183 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 FNDC9Q8TBE3 224 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 AKAP1Q92667 903 aaKnown RBP eCLIP7.46□□□□□ -1.22
IFT43-201ENST00000238628 GCDHQ92947 438 aaPredicted RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 KLHL29Q96CT2 875 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 CDK15Q96Q40 435 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 MRPL1Q9BYD6 325 aaKnown RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 PRRG4Q9BZD6 226 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 STMN4Q9H169 189 aaPredicted RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 ZNF696Q9H7X3 374 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 NOL11Q9H8H0 719 aaKnown RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 SAYSD1Q9NPB0 183 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 FANCFQ9NPI8 374 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 MED11Q9P086 117 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 PPP4R1LQ9P1A2 415 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 ACOT9Q9Y305 439 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 SNX24Q9Y343 169 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 ZNF175Q9Y473 711 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 ZNF780BQ9Y6R6 833 aa7.46□□□□□ -1.22
IFT43-201ENST00000238628 YLPM1P49750 1951 aaKnown RBP7.46□□□□□ -1.22
IFT43-201ENST00000238628 MALRD1Q5VYJ5 2156 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 ALPK2Q86TB3 2170 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 TCRBV9S1A1TA0A576 114 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 FAM234BA2RU67 622 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 FAM159BA6NKW6 160 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 B4DXG7 233 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 KIAA0513O60268 411 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 NME6O75414 186 aaPredicted RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 PLGP00747 810 aaPredicted RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 ALDOAP04075 364 aaKnown RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 CT45A8P0DMV1 189 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 CT45A9P0DMV2 189 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 PCSK2P16519 638 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 CDKN1AP38936 164 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 ALDH9A1P49189 494 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 COMPP49747 757 aaPredicted RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 CCNG1P51959 295 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 GAS1P54826 345 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 CTBP2P56545 445 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 CORO7P57737 925 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 MRPS22P82650 360 aaKnown RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 DUSP2Q05923 314 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 LTB4RQ15722 352 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 FAM83EQ2M2I3 478 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 CT45A2Q5DJT8 189 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 SGO1Q5FBB7 561 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 ALKBH2Q6NS38 261 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 PPP4R4Q6NUP7 873 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 STAC2Q6ZMT1 411 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 DNM1P46Q6ZS02 220 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 METTL4Q8N3J2 472 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 LRRC17Q8N6Y2 441 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 OR2M3Q8NG83 312 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 UHMK1Q8TAS1 419 aaKnown RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 KCTD4Q8WVF5 259 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 GFM2Q969S9 779 aaKnown RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 EFHD2Q96C19 240 aaPredicted RBP7.45□□□□□ -1.22
IFT43-201ENST00000238628 TM4SF18Q96CE8 201 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 HS6ST2Q96MM7 605 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 TMEM204Q9BSN7 226 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 PTGES2Q9H7Z7 377 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 PFDN4Q9NQP4 134 aa7.45□□□□□ -1.22
IFT43-201ENST00000238628 SDHAF3Q9NRP4 125 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms