RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 C9orf40Q8IXQ3 194 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 OR1N1Q8NGS0 311 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 OR52P1PQ8NH57 321 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 PROX1Q92786 737 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 ZNF354BQ96LW1 612 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 ZNF300Q96RE9 604 aaPredicted RBP17.22■□□□□ 0.35
SNX17-201ENST00000233575 BARD1Q99728 777 aaKnown RBP17.22■□□□□ 0.35
SNX17-201ENST00000233575 WDR77Q9BQA1 342 aaPredicted RBP17.22■□□□□ 0.35
SNX17-201ENST00000233575 NRSN2Q9GZP1 204 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 THSD1Q9NS62 852 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 RLIMQ9NVW2 624 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 PRODH2Q9UF12 536 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 GPN3Q9UHW5 284 aaPredicted RBP17.22■□□□□ 0.35
SNX17-201ENST00000233575 GPR55Q9Y2T6 319 aaPredicted RBP17.22■□□□□ 0.35
SNX17-201ENST00000233575 LRRC42Q9Y546 428 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 SDK2Q58EX2 2172 aa17.22■□□□□ 0.35
SNX17-201ENST00000233575 EI24O14681 340 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 BRINP1O60477 761 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 KLF7O75840 302 aaPredicted RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 HOXB6P17509 224 aaKnown RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 GPR143P51810 404 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 NCF4Q15080 339 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 OTUD3Q5T2D3 398 aaPredicted RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 CARM1Q86X55 608 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 RASSF5Q8WWW0 418 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 METTL21AQ8WXB1 218 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 GAL3ST4Q96RP7 486 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 SPATA5L1Q9BVQ7 753 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 DDA1Q9BW61 102 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 MTHFD2LQ9H903 347 aaPredicted RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 WDR54Q9H977 334 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 Q9N2J8 555 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 FREM2Q5SZK8 3169 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 C7orf72A4D263 438 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 PROB1E7EW31 1015 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 FRS3O43559 492 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 KIAA0513O60268 411 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 UMODP07911 640 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 TRHRP34981 398 aaPredicted RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 DCTP40126 519 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 ZNF619Q8N2I2 560 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 CLIP4Q8N3C7 705 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 CATSPER1Q8NEC5 780 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 ADIPOR1Q96A54 375 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 SLC46A1Q96NT5 459 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 BTBD9Q96Q07 612 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 SAP130Q9H0E3 1048 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 NXF5Q9H1B4 397 aaKnown RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 ZNF223Q9UK11 482 aaPredicted RBP17.21■□□□□ 0.35
SNX17-201ENST00000233575 TESMINQ9Y4I5 508 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 GVINP1Q7Z2Y8 2422 aa17.21■□□□□ 0.35
SNX17-201ENST00000233575 CDC14CA4D256 554 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 AGAP5A6NIR3 686 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 E2F6O75461 281 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 UGT2B17O75795 530 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 SEC24DO94855 1032 aaPredicted RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 DLGAP3O95886 979 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 AK1P00568 194 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 IFNW1P05000 195 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 RRM2P31350 389 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 EBPQ15125 230 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 PPP4R4Q6NUP7 873 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 TMEM205Q6UW68 189 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 BCORP1Q8N888 145 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 C7orf57Q8NEG2 295 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 NFAM1Q8NET5 270 aaPredicted RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 C9orf16Q9BUW7 83 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 SPRY4Q9C004 299 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 RHCGQ9UBD6 479 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 CBLCQ9ULV8 474 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 ZNF443Q9Y2A4 671 aaPredicted RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 PTRH2Q9Y3E5 179 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 OR10H1Q9Y4A9 318 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 SAGE2PA6NJ88 616 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 C9J4A7 227 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 LGI1O95970 557 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 PRKACGP22612 351 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 PIGAP37287 484 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 KCNC4Q03721 635 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 FOXD4Q12950 439 aaPredicted RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 TARDBPQ13148 414 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX17-201ENST00000233575 EIF3IQ13347 325 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 GANABQ14697 944 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 PAPD4Q6PIY7 484 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 ZNF836Q6ZNA1 936 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 CPEB2Q7Z5Q1 589 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 STK32CQ86UX6 486 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 APCDD1LQ8NCL9 501 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 MORN4Q8NDC4 146 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 OR6T1Q8NGN1 323 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 WDR36Q8NI36 951 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 ART5Q96L15 291 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 ZPBPQ9BS86 351 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 LIN28AQ9H9Z2 209 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 COPS7AQ9UBW8 275 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 SAMHD1Q9Y3Z3 626 aaKnown RBP17.2■□□□□ 0.34
SNX17-201ENST00000233575 ENPP4Q9Y6X5 453 aa17.2■□□□□ 0.34
SNX17-201ENST00000233575 G3V2T6 193 aa17.19■□□□□ 0.34
SNX17-201ENST00000233575 FFAR1O14842 300 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms