RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RNF44Q7L0R7 432 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 TSEN54Q7Z6J9 526 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 KIAA0907Q7Z7F0 614 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 ACOT11Q8WXI4 607 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 MTHFD2LQ9H903 347 aaPredicted RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 FGF22Q9HCT0 170 aa14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 TXNL4BQ9NX01 149 aaKnown RBP14.04□□□□□ -0.16
UBE2D4-201ENST00000222402 J3QLW9 94 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 LDB3O75112 727 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 STX11O75558 287 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ACP2P11117 423 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF19P17023 458 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 BMP8BP34820 402 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 GABRA3P34903 492 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 RPS25P62851 125 aaKnown RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 TMEM53Q6P2H8 277 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ASB18Q6ZVZ8 466 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 PRICKLE2Q7Z3G6 844 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 BMP8AQ7Z5Y6 402 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 PHC2Q8IXK0 858 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 SFXN5Q8TD22 340 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 RMI1Q9H9A7 625 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 HHATLQ9HCP6 504 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 SIRT3Q9NTG7 399 aaPredicted RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 HRASLS2Q9NWW9 162 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 NTNG1Q9Y2I2 539 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 MED31Q9Y3C7 131 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 CLCA3PQ9Y6N3 262 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 SCN3AQ9NY46 2000 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF670-ZNF695F2Z2N8 137 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 REM1O75628 298 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 PKLRP30613 574 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ARL4DP49703 201 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 TMEM31Q5JXX7 168 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 SLC48A1Q6P1K1 146 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 FIGLAQ6QHK4 219 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 DGLUCYQ7Z3D6 616 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 C7orf57Q8NEG2 295 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 HMGB4Q8WW32 186 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ELP4Q96EB1 424 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 MS4A4EQ96PG1 132 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 NT5DC2Q9H857 520 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 TRPV5Q9NQA5 729 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 NDOR1Q9UHB4 597 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ZFR2Q9UPR6 939 aaKnown RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 RCBTB2O95199 551 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 PIPP12273 146 aaPredicted RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ETV5P41161 510 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ETV1P50549 477 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 EEF1A2Q05639 463 aaKnown RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 TSPAN31Q12999 210 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 AGBL4Q5VU57 503 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 ZNF761Q86XN6 746 aaPredicted RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 Q8N402 240 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 NANOGP1Q8N7R0 232 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 OR4D11Q8NGI4 311 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 FRMD6Q96NE9 622 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 WACQ9BTA9 647 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 STMN3Q9NZ72 180 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 A4GNTQ9UNA3 340 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 DIMT1Q9UNQ2 313 aaKnown RBP14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 KCNE3Q9Y6H6 103 aa14.03□□□□□ -0.16
UBE2D4-201ENST00000222402 PRSS38A1L453 326 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 ARRDC5A6NEK1 342 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 TRIM64BA6NI03 449 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 PGDP52209 483 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 ACBD7Q8N6N7 88 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 GAL3ST3Q96A11 431 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 SOHLH2Q9NX45 425 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 OR6C2Q9NZP2 312 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 CDV3Q9UKY7 258 aaKnown RBP14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 FRMPD3Q5JV73 1810 aa14.02□□□□□ -0.16
UBE2D4-201ENST00000222402 FCMRO60667 390 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 IL7P13232 177 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 PVRP15151 417 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 AKT2P31751 481 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 OPRD1P41143 372 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 PCBP4P57723 403 aaKnown RBP14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 VSX2P58304 361 aaPredicted RBP14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 SHC2P98077 582 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 C6orf183Q5T699 404 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 GDPD3Q7L5L3 318 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 NKAIN4Q8IVV8 208 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 LRRC56Q8IYG6 542 aaPredicted RBP14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 MSRAQ9UJ68 235 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 ANAPC1Q9H1A4 1944 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 C12orf71A8MTZ7 269 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 CDC123O75794 336 aaPredicted RBP14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 STAT5AP42229 794 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 PDX1P52945 283 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 SSX1Q16384 188 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 PUS10Q3MIT2 529 aaKnown RBP14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 SYT14Q8NB59 555 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 FAM83CQ9BQN1 747 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 CRISPLD2Q9H0B8 497 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 GTF2A1LQ9UNN4 478 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 MRPS33Q9Y291 106 aaKnown RBP14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 PCDHGA4Q9Y5G9 962 aa14.02□□□□□ -0.17
UBE2D4-201ENST00000222402 UNC119BA6NIH7 251 aa14.01□□□□□ -0.17
UBE2D4-201ENST00000222402 SPINT1O43278 529 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms