RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GBX2P52951 348 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 CAV3P56539 151 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 RAB14P61106 215 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 CRYZQ08257 329 aaKnown RBP11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 PRSS36Q5K4E3 855 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 SAMD12Q8N8I0 201 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC16A11Q8NCK7 471 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 PITX2Q99697 317 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 DOK1Q99704 481 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 ZNF226Q9NYT6 803 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 ACTR10Q9NZ32 417 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 EXTL2Q9UBQ6 330 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 TMEM5Q9Y2B1 443 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 DOCK6Q96HP0 2047 aa11.61□□□□□ -0.55
TM9SF4-201ENST00000217315 A0A1W2PR48 441 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 KHDRBS3O75525 346 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 ACSL1P33121 698 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 MESP2Q0VG99 397 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 EXOSC7Q15024 291 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 SAXO2Q658L1 398 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 CHMP1BQ7LBR1 199 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 GID4Q8IVV7 300 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PHOSPHO1Q8TCT1 267 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 RNF31Q96EP0 1072 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 MMABQ96EY8 250 aaPredicted RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 USP36Q9P275 1121 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 A8MU76 341 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PRKYO43930 277 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 FXNQ16595 210 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 INAVAQ3KP66 663 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 FAM111BQ6SJ93 734 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 SPRED2Q7Z698 418 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PMEPA1Q969W9 287 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 GPR174Q9BXC1 333 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 DDX31Q9H8H2 851 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 NEK6Q9HC98 313 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 MRPL39Q9NYK5 338 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 CXorf51AA0A1B0GTR3 108 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 A0A1B0GVT2 93 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 A0A1W2PRG6 482 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 POM121BA6NF01 834 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 DBIP07108 87 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 CISD3P0C7P0 127 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 F8A1P23610 371 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC6A6P31641 620 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 STAT5AP42229 794 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 RHAGQ02094 409 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 TBC1D25Q3MII6 688 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 CCDC157Q569K6 752 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 SLX4IPQ5VYV7 408 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PRR23CQ6ZRP0 262 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 SLC16A12Q6ZSM3 486 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 YIPF6Q96EC8 236 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 KLHDC7BQ96G42 594 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PEX11GQ96HA9 241 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 OR8D2Q9GZM6 311 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 MED28Q9H204 178 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 PCDHGB1Q9Y5G3 927 aa11.6□□□□□ -0.55
TM9SF4-201ENST00000217315 H0Y8X5 98 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 XKRYO14609 159 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CSTAP01040 98 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 HK1P19367 917 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ATP12AP54707 1039 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 C6orf183Q5T699 404 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 PAQR6Q6TCH4 344 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 Q6ZSR6 202 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CAMKMTQ7Z624 323 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CEACAM19Q7Z692 300 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 COMMD2Q86X83 199 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ZNF784Q8NCA9 323 aaPredicted RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CCDC32Q9BV29 185 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 GNG8Q9UK08 70 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 DOCK4Q8N1I0 1966 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 TMEM150CB9EJG8 249 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 UBXN7O94888 489 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 EDNRAP25101 427 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 PTPN6P29350 595 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 RCVRNP35243 200 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 LIM2P55344 173 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ADAM15Q13444 863 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 UBXN2BQ14CS0 331 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 SPATC1Q76KD6 591 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 TSTD1Q8NFU3 115 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 OR2A1Q8NGT9 310 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 LINC00615Q96LM1 132 aaPredicted RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 SERINC2Q96SA4 455 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 GAL3ST1Q99999 423 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CLEC4MQ9H2X3 399 aaPredicted RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 BRD7Q9NPI1 651 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 PLCXD1Q9NUJ7 323 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 CCDC59Q9P031 241 aaKnown RBP11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ING4Q9UNL4 249 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 ZAR1LA6NP61 321 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 A8MVJ9 347 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 MCIDASD6RGH6 385 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 RDH16O75452 317 aa11.59□□□□□ -0.55
TM9SF4-201ENST00000217315 GZMMP51124 257 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms