RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 PRR14Q9BWN1 585 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 NDEL1Q9GZM8 345 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 MRPS30Q9NP92 439 aaKnown RBP12.46□□□□□ -0.41
SRP54-201ENST00000216774 INSL6Q9Y581 213 aa12.46□□□□□ -0.41
SRP54-201ENST00000216774 GABRPO00591 440 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 SLC19A2O60779 497 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 HMGN1P05114 100 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 CELP19835 753 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 ALAS2P22557 587 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 PTGER1P34995 402 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 RACK1P63244 317 aaKnown RBP12.46□□□□□ -0.42
SRP54-201ENST00000216774 ABATP80404 500 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 BDH1Q02338 343 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.42
SRP54-201ENST00000216774 TATDN3Q17R31 274 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 PGGHGQ32M88 737 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 SLC30A6Q6NXT4 461 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 MBOAT2Q6ZWT7 520 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 VRK2Q86Y07 508 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 MARCH9Q86YJ5 346 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 PEX5LQ8IYB4 626 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 NUP43Q8NFH3 380 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 OR4F15Q8NGB8 312 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 ELP4Q96EB1 424 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 KCNJ15Q99712 375 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 TMEM43Q9BTV4 400 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.42
SRP54-201ENST00000216774 TMED9Q9BVK6 235 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 SARGQ9BW04 601 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 XKR8Q9H6D3 395 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 WDR26Q9H7D7 661 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 CHST2Q9Y4C5 530 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 PDE4DIPQ5VU43 2346 aa12.46□□□□□ -0.42
SRP54-201ENST00000216774 SGK494L7N484 410 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 FRS3O43559 492 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 OR5F1O95221 314 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 FAM157BP0CG42 384 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 TEAD1P28347 426 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 TRHRP34981 398 aaPredicted RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 VIPR2P41587 438 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 MC3RP41968 323 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 CD83Q01151 205 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 IL18Q14116 193 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 AGERQ15109 404 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 SF3A2Q15428 464 aaKnown RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 ZNF620Q6ZNG0 422 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 PLEKHM3Q6ZWE6 761 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 C16orf62Q7Z3J2 963 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 TRIM48Q8IWZ4 208 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 POF1BQ8WVV4 589 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 ACOT12Q8WYK0 555 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 TRIM43Q96BQ3 446 aaPredicted RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 ZNF707Q96C28 371 aaPredicted RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 ZG16BQ96DA0 208 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 DCLRE1CQ96SD1 692 aaKnown RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 HDHD5Q9BXW7 423 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 ACTRT3Q9BYD9 372 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 CRISPLD2Q9H0B8 497 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 C11orf49Q9H6J7 331 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 TBC1D17Q9HA65 648 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 PRSS16Q9NQE7 514 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 NLGN3Q9NZ94 848 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 BOLA1Q9Y3E2 137 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 CDH10Q9Y6N8 788 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 MAU2Q9Y6X3 613 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 HEATR5BQ9P2D3 2071 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 OTOL1A6NHN0 477 aaPredicted RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 LYRM1O43325 122 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 POU2F2P09086 479 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 PSKH1P11801 424 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 AVPR1BP47901 424 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 RGS8P57771 180 aaPredicted RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 C18orf63Q68DL7 685 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 ZNF322Q6U7Q0 402 aaPredicted RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 C11orf74Q86VG3 221 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 SFTPA1Q8IWL2 248 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 UBE2J2Q8N2K1 259 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 OR2T33Q8NG76 320 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 KLK6Q92876 244 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 ZFYVE19Q96K21 471 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 ZNF681Q96N22 645 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 MACROD1Q9BQ69 325 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 TIMM29Q9BSF4 260 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 OSGEPL1Q9H4B0 414 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 SLC6A20Q9NP91 592 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 B3GAT2Q9NPZ5 323 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 IMP3Q9NV31 184 aaKnown RBP12.45□□□□□ -0.42
SRP54-201ENST00000216774 PHF11Q9UIL8 331 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 CBLCQ9ULV8 474 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
SRP54-201ENST00000216774 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 DUXAA6NLW8 204 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 CH25HO95992 272 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 STATHP02808 62 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 C8orf89P0DMQ9 161 aa12.44□□□□□ -0.42
SRP54-201ENST00000216774 CERS1P27544 350 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms