RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 ERVK-18Q9QC07 812 aa11.9□□□□□ -0.5
LMCD1-201ENST00000157600 TDRD15B5MCY1 1934 aaKnown RBP11.9□□□□□ -0.5
LMCD1-201ENST00000157600 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 APOFQ13790 326 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 OR5M3Q8NGP4 307 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 ARL11Q969Q4 196 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 RRNAD1Q96FB5 475 aaKnown RBP11.9□□□□□ -0.51
LMCD1-201ENST00000157600 D6RAR5 112 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 P04436 131 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 GNRHRP30968 328 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 HOXA9P31269 272 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 GGT5P36269 586 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 PPP1R8Q12972 351 aaKnown RBP11.9□□□□□ -0.51
LMCD1-201ENST00000157600 PSAPL1Q6NUJ1 521 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 GPR137CQ8N3F9 429 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 GPR148Q8TDV2 347 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 TFAP2CQ92754 450 aa11.9□□□□□ -0.51
LMCD1-201ENST00000157600 A0A1W2PP55 124 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 KLF8O95600 359 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 STSP08842 583 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 DCAF7P61962 342 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 DLX2Q07687 328 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 DUS1LQ6P1R4 473 aaKnown RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ZNF852Q6ZMS4 543 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ZNF100Q8IYN0 542 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 KDM1BQ8NB78 822 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 OR7G3Q8NG95 312 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 CD200R1Q8TD46 325 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 AUTS2Q8WXX7 1259 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 MR1Q95460 341 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 FIZ1Q96SL8 496 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 GHRLQ9UBU3 117 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 A0A1W2PQU0 124 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 AHRP35869 848 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ALDH3B2P48448 385 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ERVPABLB-1P60509 514 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ACY1Q03154 408 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 LRRC56Q8IYG6 542 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 TREX1Q9NSU2 369 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 A0A1W2PQL4 384 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 TCRBV21S2A2A0A5A6 115 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ZNF850A8MQ14 1090 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ARF3P61204 181 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ARF1P84077 181 aaKnown RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 CDK5R2Q13319 367 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 UEVLDQ8IX04 471 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 OR10Q1Q8NGQ4 319 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ZFYVE21Q9BQ24 234 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 MRPL3P09001 348 aaKnown RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ZNF280BQ86YH2 543 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 IL17RCQ8NAC3 791 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 CASTOR1Q8WTX7 329 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ACSS1Q9NUB1 689 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 NAALAD2Q9Y3Q0 740 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 SVILO95425 2214 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 IGLON5A6NGN9 336 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ETV4P43268 484 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 MAP2K4P45985 399 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 USF2Q15853 346 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 NIPAL3Q6P499 406 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 LINC00299Q6ZSB3 139 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 ZNF366Q8N895 744 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 SCAMP4Q969E2 229 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 CCDC120Q96HB5 630 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 TMEM165Q9HC07 324 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 DMRT3Q9NQL9 472 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 GLTPQ9NZD2 209 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 C11orf98E9PRG8 122 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 NME4O00746 187 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 LPLP06858 475 aa11.89□□□□□ -0.51
LMCD1-201ENST00000157600 STK19P49842 368 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 MARCH4Q9P2E8 410 aaPredicted RBP11.89□□□□□ -0.51
LMCD1-201ENST00000157600 LOC102725191A0A1B0GVB3 256 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 GJB5O95377 273 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 CLIC3O95833 236 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 GPR176Q14439 515 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 ZNF300Q96RE9 604 aaPredicted RBP11.88□□□□□ -0.51
LMCD1-201ENST00000157600 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 CSF2P04141 144 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 RAB40ALP0C0E4 278 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 ETFAP13804 333 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 JUNDP17535 347 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 CDKN2CP42773 168 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 HNRNPFP52597 415 aaKnown RBP11.88□□□□□ -0.51
LMCD1-201ENST00000157600 TBCEQ15813 527 aaPredicted RBP11.88□□□□□ -0.51
LMCD1-201ENST00000157600 FAM182AQ5T1J6 154 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 RNF113BQ8IZP6 322 aaKnown RBP11.88□□□□□ -0.51
LMCD1-201ENST00000157600 OR52E2Q8NGJ4 325 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 PPP1R35Q8TAP8 253 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 RAB40AQ8WXH6 277 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 OR1F2PQ96R84 312 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 BTBD2Q9BX70 525 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 ADAMTS5Q9UNA0 930 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 ASXL3Q9C0F0 2248 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 LDB2O43679 373 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 CD34P28906 385 aa11.88□□□□□ -0.51
LMCD1-201ENST00000157600 CDHR3Q6ZTQ4 885 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms