RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Cdv3Q4VAA2 281 aaKnown RBP13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Dlx3Q64205 287 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Doxl2Q6IMK7 723 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 JamlQ80UL9 379 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Slfn5Q8CBA2 884 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Tbc1d20Q9D9I4 402 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cylc1A0A1B0GR13 642 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Olfr675A0A1B0GSE1 317 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gm20715E9Q3L7 95 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gm5458L7N219 204 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Scg5P12961 212 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 F9P16294 471 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 CtsdP18242 410 aaKnown RBP13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gjb1P28230 283 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 PfplQ5RKV8 702 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Ttyh3Q6P5F7 524 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Syt14Q7TN84 555 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Vrk1Q80X41 440 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Znf668Q8K2R5 619 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Fam69aQ9D6I7 428 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Prl8a1Q9DAV8 240 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cml5Q9QXS8 227 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 PrebQ9WUQ2 417 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cldn34b1B1AZQ8 209 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Amy2a1E9PV85 245 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Tmem44E9Q4M0 433 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Chrna9G3X8Z7 479 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Zfp989H3BLB0 661 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Bnip3O55003 187 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cacng2O88602 323 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Amy2P00688 508 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cdc25bP30306 576 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Pou2f2Q00196 463 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 OgdhQ60597 1023 aaKnown RBP13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Csnk2a1Q60737 391 aaKnown RBP13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Ifna16Q810G1 189 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Tmem62Q8BXJ9 643 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 MslnlQ8C160 685 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Olfr617Q8VGA1 318 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cyp2u1Q9CX98 530 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cldn34b2Q9D9N2 209 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Wdr53Q9DB94 358 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Mocs2Q9Z223 189 aa13.33□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Tssk2O54863 358 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Rps27aP62983 156 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Uba52P62984 128 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gm5127Q3UQH6 212 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Pcdhga12Q91XY7 932 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Lgals2Q9CQW5 130 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Spaca7Q9D2S4 182 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Il10P18893 178 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Bmp7P23359 430 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Wnt7aP24383 349 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 CskP41241 450 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Adra1bP97717 514 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Cypt4Q6P925 153 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Chst9Q76EC5 413 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Olfr1087Q7TR63 313 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Zfand1Q8BFR6 268 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Mfsd9Q8C0T7 466 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Olfr52Q8VFL0 319 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 B4galt3Q91YY2 395 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 MvdQ99JF5 401 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Eral1Q9CZU4 437 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Snu13Q9D0T1 128 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Tmem200cJ3QK46 637 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gm28051J3QMA2 81 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Vmn2r61L7N2B8 865 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Hmgn1P18608 96 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 SgcaP82350 387 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 HepacamQ640R3 418 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Galk2Q68FH4 458 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 CdnfQ8CC36 187 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Batf2Q8R1H8 277 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Zfand2bQ91X58 257 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 TriobpQ99KW3 2014 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Scgb2b3D2XZ38 112 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gm14139F6ZS36 494 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Vmn2r60L7N2A1 853 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Gtf2h4O70422 463 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Bard1O70445 765 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Pcdhga7Q6DD96 935 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Ankmy1Q8C0W1 906 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Tm9sf3Q9ET30 587 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Rnf11Q9QYK7 154 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Zfp534A2A7A1 661 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Olfr1193A2AV13 318 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Mettl11bB2RXM4 283 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Prl8a2O54832 240 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Eef1a1P10126 462 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Igfbp6P47880 238 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 BmxP97504 651 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Elf3Q3UPW2 391 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Zfp184Q7TSH9 737 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 DenrQ9CQJ6 198 aaKnown RBP13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Etv5Q9CXC9 510 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Phlpp1Q8CHE4 1687 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Fpr-rs4A4FUQ5 323 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Crisp4E9PVG4 293 aa13.32□□□□□ -0.28
Col5a1-201ENSMUST00000028280 Lmo2P25801 158 aa13.32□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms