RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PNLIPRP2P54317 469 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 PSMD4P55036 377 aaKnown RBP11.37□□□□□ -0.59
LINC00339-213ENST00000642137 MRPS22P82650 360 aaKnown RBP11.37□□□□□ -0.59
LINC00339-213ENST00000642137 LIPEQ05469 1076 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 GNA13Q14344 377 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ADRM1Q16186 407 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 DECR1Q16698 335 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ACER2Q5QJU3 275 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 GCNT6Q5T4J0 391 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 AGAP7PQ5VUJ5 663 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 B3GNTL1Q67FW5 361 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ERICH5Q6P6B1 374 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 DND1Q8IYX4 353 aaKnown RBP11.37□□□□□ -0.59
LINC00339-213ENST00000642137 C10orf111Q8N326 155 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 SIRT6Q8N6T7 355 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 BCORP1Q8N888 145 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 COX18Q8N8Q8 333 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 FBXO30Q8TB52 745 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 AGAP4Q96P64 663 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 TRNT1Q96Q11 434 aaKnown RBP11.37□□□□□ -0.59
LINC00339-213ENST00000642137 RASL10BQ96S79 203 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 SDF2Q99470 211 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 G6PC3Q9BUM1 346 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF552Q9H707 407 aaPredicted RBP11.37□□□□□ -0.59
LINC00339-213ENST00000642137 A4GALTQ9NPC4 353 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 CALML5Q9NZT1 146 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 P2RX2Q9UBL9 471 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 CD300AQ9UGN4 299 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF451Q9Y4E5 1061 aa11.37□□□□□ -0.59
LINC00339-213ENST00000642137 A6NL46 340 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 FAM220BPB1ANY3 271 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 TSPAN2O60636 221 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF354AO60765 605 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 REM1O75628 298 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 DNAJC8O75937 253 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 IL33O95760 270 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 NUDT7P0C024 238 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 FBXO45P0C2W1 286 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 NR2F1P10589 423 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 HSD17B1P14061 328 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ABCD3P28288 659 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 KRT20P35900 424 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 SSR4P51571 173 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 NCALDP61601 193 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 CXADRP78310 365 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 SYPL1Q16563 259 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ZNF630Q2M218 657 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 VMACQ2NL98 169 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 SAMD4BQ5PRF9 694 aaKnown RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 DCST2Q5T1A1 773 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ABHD17BQ5VST6 288 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 PRAMEF8Q5VWM4 474 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 PRAMEF7Q5VXH5 474 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 FCRLBQ6BAA4 426 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 BORAQ6PGQ7 559 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 OPN5Q6U736 354 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ISLR2Q6UXK2 745 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 BNC2Q6ZN30 1099 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 C16orf47Q6ZP98 133 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 LRRC74BQ6ZQY2 392 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 NUP54Q7Z3B4 507 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 C16orf62Q7Z3J2 963 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 PTOV1Q86YD1 416 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 SLC30A8Q8IWU4 369 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 GPALPP1Q8IXQ4 340 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 FDCSPQ8NFU4 85 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 TNIP2Q8NFZ5 429 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 SLC38A5Q8WUX1 472 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 DIO2Q92813 273 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 PMM1Q92871 262 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 TMBIM1Q969X1 311 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 OMA1Q96E52 524 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 OTUB1Q96FW1 271 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 RMND5BQ96G75 393 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 REXO5Q96IC2 774 aaKnown RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 SAP130Q9H0E3 1048 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 MMADHCQ9H3L0 296 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ALG2Q9H553 416 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 BCL2L10Q9HD36 194 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 POLE3Q9NRF9 147 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 GPR83Q9NYM4 423 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ABI3Q9P2A4 366 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 ZMIZ1Q9ULJ6 1067 aa11.36□□□□□ -0.59
LINC00339-213ENST00000642137 A0A0G2JPF8 293 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ELOVL7A1L3X0 281 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 PRORSD1PA6NEY8 169 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 OR6C70A6NIJ9 312 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 HNRNPCL2B2RXH8 293 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 HNRNPCL3B7ZW38 293 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 MAN1A2O60476 641 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ABCB7O75027 752 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 STX11O75558 287 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 PPM1BO75688 479 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 ITGB2P05107 769 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 HNRNPCL4P0DMR1 293 aa11.35□□□□□ -0.59
LINC00339-213ENST00000642137 HTR1EP28566 365 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms