RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 SLC25A25Q6KCM7 469 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 GPAT4Q86UL3 456 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 OR52N2Q8NGI0 321 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 KCNJ15Q99712 375 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 FNDC11Q9BVV2 318 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF768Q9H5H4 540 aaKnown RBP12.95□□□□□ -0.34
SCARB2-227ENST00000640957 ANGPT4Q9Y264 503 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 GBF1Q92538 1859 aa12.95□□□□□ -0.34
SCARB2-227ENST00000640957 CPSF4LA6NMK7 179 aaKnown RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 ARPC5O15511 151 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 SERPIND1P05546 499 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 LCN1P31025 176 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 TPMTP51580 245 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 CDH11P55287 796 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 TCTE1Q5JU00 501 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 AGTRAPQ6RW13 159 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 DGLUCYQ7Z3D6 616 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 OR2T4Q8NH00 348 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 ASB11Q8WXH4 323 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 FAM46AQ96IP4 442 aaKnown RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 DDX31Q9H8H2 851 aaKnown RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF840PA6NDX5 716 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 OR2W5A6NFC9 320 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 ARHGEF33A8MVX0 844 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 PRR23D1E9PI22 279 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 PRKRAO75569 313 aaKnown RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 WNT1P04628 370 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 GALTP07902 379 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 PRR23D2P0DMB1 279 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 GPR4P46093 362 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 LIMS1P48059 325 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 DGKGP49619 791 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 VEGFCP49767 419 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 ZNF273Q14593 569 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 OPCMLQ14982 345 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 NLRC3Q7RTR2 1065 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 SDR16C5Q8N3Y7 309 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 TMEM169Q96HH4 297 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 TTYH1Q9H313 450 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 MRPL39Q9NYK5 338 aaKnown RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 BTNL2Q9UIR0 455 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 CHD5Q8TDI0 1954 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 PLXNA4Q9HCM2 1894 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 hCG_1807616A0A1W2PRN6 198 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 E9PI62 339 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 GLAP06280 429 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 AHRP35869 848 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 SPAM1P38567 509 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 SLC1A3P43003 542 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 GBX2P52951 348 aaPredicted RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 SNRPGP62308 76 aaKnown RBP12.94□□□□□ -0.34
SCARB2-227ENST00000640957 FAM74A1Q5RGS3 127 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 TMEM107Q6UX40 140 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 UBE2Q1Q7Z7E8 422 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 L3MBTL4Q8NA19 623 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 WDR20Q8TBZ3 569 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 CA10Q9NS85 328 aa12.94□□□□□ -0.34
SCARB2-227ENST00000640957 A0A1W2PQ45 241 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 A0A1W2PQY0 241 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 H7C4K7 107 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 GMDSO60547 372 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MMP20O60882 483 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MAGEB1P43366 347 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 PXNP49023 591 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 HNMTP50135 292 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 KCNC3Q14003 757 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 CLLU1Q5K131 121 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ANXA8L1Q5VT79 327 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MEDAGQ5VYS4 303 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 LRRC70Q7Z2Q7 622 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 FAM9CQ8IZT9 166 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 KRT78Q8N1N4 520 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 BCL7CQ8WUZ0 217 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 DEFB118Q96PH6 123 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ADAT1Q9BUB4 502 aaKnown RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SEMA4CQ9C0C4 833 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 OSGEPL1Q9H4B0 414 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 LIN7BQ9HAP6 207 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ADAM30Q9UKF2 790 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 MYO16Q9Y6X6 1858 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SEC14L5O43304 696 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 PI15O43692 258 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 SPDEFO95238 335 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 LGI1O95970 557 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ADAP00813 363 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 H2AFB2P0C5Z0 115 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 PIPP12273 146 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 GNSP15586 552 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 ATP5A1P25705 553 aaKnown RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TIA1P31483 386 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 GABRA5P31644 462 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 NSG1P42857 185 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 CTSOP43234 321 aaPredicted RBP12.93□□□□□ -0.34
SCARB2-227ENST00000640957 PTSQ03393 145 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 COL28A1Q2UY09 1125 aa12.93□□□□□ -0.34
SCARB2-227ENST00000640957 TMEM255AQ5JRV8 349 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms