RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 FGF4P08620 206 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 IFI6P09912 130 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 TIMP3P35625 211 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 RPL38P63173 70 aaKnown RBP22.96■■□□□ 1.27
VEGFA-230ENST00000640482 CYP27C1Q4G0S4 372 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 SH2D4BQ5SQS7 431 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 SEM1Q6ZVN7 128 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 LIX1LQ8IVB5 337 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 DDIASQ8IXT1 998 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 OR4N2Q8NGD1 307 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 OR2T11Q8NH01 316 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 GFM2Q969S9 779 aaKnown RBP22.96■■□□□ 1.27
VEGFA-230ENST00000640482 ZNF764Q96H86 408 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-230ENST00000640482 WDYHV1Q96HA8 205 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 OR2B2Q9GZK3 357 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 MCCC2Q9HCC0 563 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 TRAF6Q9Y4K3 522 aa22.96■■□□□ 1.27
VEGFA-230ENST00000640482 FBN2P35556 2912 aa22.95■■□□□ 1.27
VEGFA-230ENST00000640482 LSM1O15116 133 aaKnown RBP22.95■■□□□ 1.26
VEGFA-230ENST00000640482 PSMG1O95456 288 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 SDC1P18827 310 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 ARL13AQ5H913 290 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-230ENST00000640482 DCST1Q5T197 706 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 NSUN5P2Q63ZY6 315 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 RNF138Q8WVD3 245 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 TWIST2Q8WVJ9 160 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 REEP4Q9H6H4 257 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 Q9N2J8 555 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 MRTO4Q9UKD2 239 aaKnown RBP22.95■■□□□ 1.26
VEGFA-230ENST00000640482 APCP25054 2843 aa22.95■■□□□ 1.26
VEGFA-230ENST00000640482 DVL2O14641 736 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 IL2RAP01589 272 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 CYP4B1P13584 511 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 CAPN3P20807 821 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 SRD5A2P31213 254 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 CEACAM8P31997 349 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-230ENST00000640482 GPC1P35052 558 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 SERPINB5P36952 375 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 HSPB3Q12988 150 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 RCAN2Q14206 197 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 DECR1Q16698 335 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 GALNTL6Q49A17 601 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 RFTN2Q52LD8 501 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-230ENST00000640482 ENPP6Q6UWR7 440 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 IFNEQ86WN2 208 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 TNIP2Q8NFZ5 429 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 ZFP28Q8NHY6 868 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 PPCDCQ96CD2 204 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 TSSK3Q96PN8 268 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 TRIB1Q96RU8 372 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 TAS2R10Q9NYW0 307 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 CBLCQ9ULV8 474 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 HCFC1P51610 2035 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 LRBAP50851 2863 aa22.94■■□□□ 1.26
VEGFA-230ENST00000640482 CD8B2A6NJW9 211 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 TTC36A6NLP5 189 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 TMEM233B4DJY2 109 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 AKAP10O43572 662 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 TBX19O60806 448 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 GRK2P25098 689 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 EVI2BP34910 448 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 ASMTP46597 345 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 PSMD4P55036 377 aaKnown RBP22.93■■□□□ 1.26
VEGFA-230ENST00000640482 ANKRD26P1Q6NSI1 321 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 ZBED6CLQ96FA7 236 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-230ENST00000640482 LRRC46Q96FV0 321 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 LMF2Q9BU23 707 aaKnown RBP22.93■■□□□ 1.26
VEGFA-230ENST00000640482 TMEM109Q9BVC6 243 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 CALHM2Q9HA72 323 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 C3orf14Q9HBI5 128 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 SH3BP4Q9P0V3 963 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 ZNF629Q9UEG4 869 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-230ENST00000640482 KCNN3Q9UGI6 736 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.93■■□□□ 1.262e-10■■□□□ 14.1
VEGFA-230ENST00000640482 DKKL1Q9UK85 242 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 FBXL2Q9UKC9 423 aa22.93■■□□□ 1.26
VEGFA-230ENST00000640482 V9GYY5 206 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-230ENST00000640482 CREBBPQ92793 2442 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 KDM4EB2RXH2 506 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-230ENST00000640482 PIP5K1BO14986 540 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 CPN1P15169 458 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 DDX5P17844 614 aaKnown RBP22.92■■□□□ 1.26
VEGFA-230ENST00000640482 BMP5P22003 454 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 GAS1P54826 345 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 GAB1Q13480 694 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 UGT3A2Q3SY77 523 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 AAGABQ6PD74 315 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 ZCCHC23Q6ZST2 131 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 ZNF551Q7Z340 670 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-230ENST00000640482 MREGQ8N565 214 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 OR4K17Q8NGC6 315 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 ZPLD1Q8TCW7 415 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 CIDECQ96AQ7 238 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-230ENST00000640482 ZNF559Q9BR84 538 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 PPP4R1LQ9P1A2 415 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 ABCG2Q9UNQ0 655 aa22.92■■□□□ 1.26
VEGFA-230ENST00000640482 MRPS18CQ9Y3D5 142 aaKnown RBP22.92■■□□□ 1.26
VEGFA-230ENST00000640482 ARHGAP21Q5T5U3 1957 aa22.91■■□□□ 1.26
VEGFA-230ENST00000640482 TMEM114B3SHH9 223 aa22.91■■□□□ 1.26
VEGFA-230ENST00000640482 MAPK1P28482 360 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms