RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 KIAA1161Q6NSJ0 714 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 WASH2PQ6VEQ5 465 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 RTL10Q7L3V2 364 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 PLCZ1Q86YW0 608 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 KLHL36Q8N4N3 616 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 NEIL3Q8TAT5 605 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 SMG7Q92540 1137 aaKnown RBP18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 FAM46AQ96IP4 442 aaKnown RBP18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 CAPNS2Q96L46 248 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 TRAF4Q9BUZ4 470 aaPredicted RBP18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 TM7SF3Q9NS93 570 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 GIMAP4Q9NUV9 329 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 MED17Q9NVC6 651 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 ADAM30Q9UKF2 790 aa18.88■□□□□ 0.61
SYNGAP1-227ENST00000638142 GLOD5A6NK44 160 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRKRAO75569 313 aaKnown RBP18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 GZMKP49863 264 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRDX1Q06830 199 aaKnown RBP18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZNF155Q12901 538 aaPredicted RBP18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 IL18Q14116 193 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 CLEC12AQ5QGZ9 265 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 MARCH9Q86YJ5 346 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 YIPF7Q8N8F6 280 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR52N1Q8NH53 320 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 ANGPTL6Q8NI99 470 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 TMEM43Q9BTV4 400 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 TMED9Q9BVK6 235 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 QRSL1Q9H0R6 528 aaKnown RBP18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 SEMA4GQ9NTN9 838 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 ASB6Q9NWX5 421 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 LIPT1Q9Y234 373 aa18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 EXOGQ9Y2C4 368 aaKnown RBP18.87■□□□□ 0.61
SYNGAP1-227ENST00000638142 GABRPO00591 440 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 SURF4O15260 269 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 LYRM1O43325 122 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 FAM157BP0CG42 384 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 FPR3P25089 353 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 STAT5AP42229 794 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 IL12RB1P42701 662 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 ERVFC1P60507 584 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRR5P85299 388 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 MESP2Q0VG99 397 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 TNK1Q13470 666 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 P2RY14Q15391 338 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CADM2Q8N3J6 435 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 TMEM145Q8NBT3 493 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 NLGN4YQ8NFZ3 816 aaPredicted RBP18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 MED30Q96HR3 178 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 IRF2BPLQ9H1B7 796 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRKAG2Q9UGJ0 569 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 ALG5Q9Y673 324 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 NOTCH4Q99466 2003 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 IGKV1-8A0A0C4DH67 115 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 FAM240BA0A1B0GVZ2 78 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CPSF4LA6NMK7 179 aaKnown RBP18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZNF780AO75290 641 aaPredicted RBP18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 IGHA1P01876 353 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 ACP5P13686 325 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CELP19835 753 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 GALP22466 123 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CLCNKAP51800 687 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 P2RX3P56373 397 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CLDN20P56880 219 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CDK3Q00526 305 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 C11orf74Q86VG3 221 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 OR4F15Q8NGB8 312 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 TTC9Q92623 222 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CNRIP1Q96F85 164 aaPredicted RBP18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 DCLRE1CQ96SD1 692 aaKnown RBP18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 KCNJ15Q99712 375 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 PRR14Q9BWN1 585 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 HDHD5Q9BXW7 423 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 SLC38A1Q9H2H9 487 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 TBC1D17Q9HA65 648 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 B3GAT2Q9NPZ5 323 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 CALML5Q9NZT1 146 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 MALT1Q9UDY8 824 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 ENTPD4Q9Y227 616 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 ASB4Q9Y574 426 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 HEATR5BQ9P2D3 2071 aa18.86■□□□□ 0.61
SYNGAP1-227ENST00000638142 SGK494L7N484 410 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 GNSP15586 552 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 PTGER1P34995 402 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 TRIM23P36406 574 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 GPLD1P80108 840 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 MLLT1Q03111 559 aaPredicted RBP18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 SF3A2Q15428 464 aaKnown RBP18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZIC1Q15915 447 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZNF697Q5TEC3 545 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 PLPP4Q5VZY2 271 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ETFBKMTQ8IXQ9 262 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 CCDC116Q8IYX3 515 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 DNAJA4Q8WW22 397 aaPredicted RBP18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 C16orf58Q96GQ5 468 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 LRRC3BQ96PB8 259 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 ZNF649Q9BS31 505 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 IL20Q9NYY1 176 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 KCNE3Q9Y6H6 103 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 A0A0G2JMP0 313 aa18.85■□□□□ 0.61
SYNGAP1-227ENST00000638142 PGRMC2O15173 223 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms