RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 KLRG1Q96E93 195 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SLC23A2Q9UGH3 650 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 PIK3C2BO00750 1634 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 ADAMTS4O75173 837 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 MVKQ03426 396 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 TRIM61Q5EBN2 209 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 TMEM173Q86WV6 379 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 MITD1Q8WV92 249 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 MUCL1Q96DR8 90 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 LRRC42Q9Y546 428 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 PCM1Q15154 2024 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 LOC105369274A0A096LPK9 316 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 RPS26P62854 115 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 HHEXQ03014 270 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 CLEC20AQ6ZU45 233 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 PRR22Q8IZ63 422 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 OR4N4Q8N0Y3 316 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 CPEB1Q9BZB8 566 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 TUBB1Q9H4B7 451 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 VDAC3Q9Y277 283 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 OR1A2Q9Y585 309 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 A8MT66 165 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 GABARAPH6UMI1 98 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 GABARAPO95166 117 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 RPS18P62269 152 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 MC2RQ01718 297 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SNTB2Q13425 540 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 LCN10Q6JVE6 187 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 LRRC55Q6ZSA7 311 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 ATG4BQ9Y4P1 393 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 PRSS51A0A1B0GVH4 220 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 KDELR3O43731 214 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 DRICH1Q6PGQ1 229 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 BRICD5Q6PL45 260 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 OR4K13Q8NH42 304 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 H1FXQ92522 213 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 ZNF419Q96HQ0 510 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 APMAPQ9HDC9 416 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 IGSF9Q9P2J2 1179 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SLC2A6Q9UGQ3 507 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SCML2Q9UQR0 700 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 NME7Q9Y5B8 376 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 UBFD1O14562 309 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 KRTCAP2Q8N6L1 136 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 PKP2Q99959 881 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 FUCA2Q9BTY2 467 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 ZNF44P15621 663 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 CATSPEREQ5SY80 951 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SYPL2Q5VXT5 272 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SPRYD7Q5W111 196 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 SFRP4Q6FHJ7 346 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 MAMDC2Q7Z304 686 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 TMEM150AQ86TG1 271 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 HS3ST4Q9Y661 456 aa16.67■□□□□ 0.26
CACNA1A-225ENST00000636389 RP1P56715 2156 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 SH2D7A6NKC9 451 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 DVL2O14641 736 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 CNIH3Q8TBE1 160 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 FAM122AQ96E09 287 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 WDR92Q96MX6 357 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 SLC29A3Q9BZD2 475 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 BTBD17A6NE02 478 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 PHYHO14832 338 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 EMC8O43402 210 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 TIMM8AO60220 97 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 ARHGEF15O94989 841 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 POU3F2P20265 443 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 THBS3P49746 956 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 SCAPQ12770 1279 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 COMMD7Q86VX2 200 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 AQP12AQ8IXF9 295 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 C3orf58Q8NDZ4 430 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 TGFB1I1O43294 461 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 BIRC7Q96CA5 298 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 NGBQ9NPG2 151 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 CHRNB1P11230 501 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 SLC22A6Q4U2R8 563 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 FCRL5Q96RD9 977 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 SMIM3Q9BZL3 60 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 OR10A5Q9H207 317 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 OR10A2Q9H208 303 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 KDM4FA0A1W2PPD8 638 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 ACTBP60709 375 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 ACTG1P63261 375 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 ZNF783Q6ZMS7 281 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 CHD2O14647 1828 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 ARL2P36404 184 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 C9orf135Q5VTT2 229 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 SHFQ7M4L6 423 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 IL17RDQ8NFM7 739 aa16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 TRMT2BQ96GJ1 504 aaKnown RBP16.66■□□□□ 0.26
CACNA1A-225ENST00000636389 A0A0D9SEW6 157 aa16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 KIAA0355O15063 1070 aa16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 BCAS2O75934 225 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 GDF1P27539 372 aa16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 SEC61A1P61619 476 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 PRDM9Q9NQV7 894 aa16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 ACTR3BQ9P1U1 418 aa16.65■□□□□ 0.26
CACNA1A-225ENST00000636389 HOXD11P31277 338 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms