RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 LRP3O75074 770 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 CEACAM4O75871 244 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 DIRAS3O95661 229 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 AK1P00568 194 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 KRT6BP04259 564 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 MBL2P11226 248 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 HOXB8P17481 243 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 CEBPBP17676 345 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 TNNI3P19429 210 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 CHRNB4P30926 498 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 GPR183P32249 361 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 LEPRP48357 1165 aaKnown RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 KRT6CP48668 564 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 XGP55808 180 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 BTG3Q14201 252 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 EXOSC7Q15024 291 aaKnown RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 RIPPLY2Q5TAB7 128 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 GALNT17Q6IS24 598 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 BNIPLQ7Z465 357 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZER1Q7Z7L7 766 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 SMIM29Q86T20 159 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 CACUL1Q86Y37 369 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 FBXO16Q8IX29 292 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 CNPY4Q8N129 248 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR5M9Q8NGP3 310 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 MRGPRDQ8TDS7 321 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 SMAP2Q8WU79 429 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 PHYHIPQ92561 330 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 NCLNQ969V3 563 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 MRPL53Q96EL3 112 aaKnown RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 C2orf48Q96LS8 159 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 GPA33Q99795 319 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 CRNKL1Q9BZJ0 848 aaKnown RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 FAM124BQ9H5Z6 455 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF71Q9NQZ8 489 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 GDF3Q9NR23 364 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 FAM212BQ9NTI7 297 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF490Q9ULM2 529 aaPredicted RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 WIPI2Q9Y4P8 454 aa4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.35□□□□□ -1.71
TRAPPC9-216ENST00000634178 FRYQ5TBA9 3013 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 FAM230AA0A1W2PPH8 454 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM89A2RUT3 159 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 C15orf61A6NNL5 157 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 F5H6K3 240 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 HAS3O00219 553 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 ANGPT2O15123 496 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 NDUFB10O96000 172 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 UMODP07911 640 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 CEACAM1P13688 526 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 GPX3P22352 226 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 GLRA1P23415 457 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMOD1P28289 359 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 PRDX6P30041 224 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 FHITP49789 147 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 LIMK2P53671 638 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 CSNK2BP67870 215 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 HSF2Q03933 536 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 KLRC3Q07444 240 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 HNRNPDQ14103 355 aaKnown RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 AGKQ53H12 422 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 WLSQ5T9L3 541 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 ASRGL1Q7L266 308 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 MISPQ8IVT2 679 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 DCUN1D3Q8IWE4 304 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 DND1Q8IYX4 353 aaKnown RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 SUMF1Q8NBK3 374 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 GMCL1P1Q8NEA9 526 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 DENND6BQ8NEG7 585 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TRIM58Q8NG06 486 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 OR52B4Q8NGK2 314 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 RDH11Q8TC12 318 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 GPR148Q8TDV2 347 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 CHPT1Q8WUD6 406 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM37Q8WXS4 190 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TMEM45BQ96B21 275 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 ZNF689Q96CS4 500 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TRIM44Q96DX7 344 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 MFSD1Q9H3U5 465 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 FNDC4Q9H6D8 234 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 COQ10BQ9H8M1 238 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 COG4Q9H9E3 785 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 ROPN1Q9HAT0 212 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 IL20RAQ9UHF4 553 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 DIMT1Q9UNQ2 313 aaKnown RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 ADGRA3Q8IWK6 1321 aa4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 BAZ2AQ9UIF9 1905 aaKnown RBP4.34□□□□□ -1.71
TRAPPC9-216ENST00000634178 KIAA1671Q9BY89 1806 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 ZBED9Q6R2W3 1325 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 A0A1B0GWJ7 208 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 RSPH10B2B2RC85 870 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 LGALS8O00214 317 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 INPP4BO15327 924 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 BUB1O43683 1085 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 KRT86O43790 486 aa4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 CSDE1O75534 798 aaKnown RBP4.33□□□□□ -1.72
TRAPPC9-216ENST00000634178 TOM1L1O75674 476 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms