RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 MTHFD2LQ9H903 347 aaPredicted RBP18.34■□□□□ 0.53
TREX1-205ENST00000625293 LIN28AQ9H9Z2 209 aaKnown RBP18.34■□□□□ 0.53
TREX1-205ENST00000625293 CCNB1IP1Q9NPC3 277 aa18.34■□□□□ 0.53
TREX1-205ENST00000625293 ADAP2Q9NPF8 381 aa18.34■□□□□ 0.53
TREX1-205ENST00000625293 DUSP22Q9NRW4 184 aa18.34■□□□□ 0.53
TREX1-205ENST00000625293 TMEM9Q9P0T7 183 aa18.34■□□□□ 0.53
TREX1-205ENST00000625293 PLCL2Q9UPR0 1127 aa18.34■□□□□ 0.53
TREX1-205ENST00000625293 SATB2Q9UPW6 733 aa18.34■□□□□ 0.53
TREX1-205ENST00000625293 IGHV5-51A0A0C4DH38 117 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 PROB1E7EW31 1015 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 H3BMQ9 156 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 BCAT2O15382 392 aaPredicted RBP18.33■□□□□ 0.53
TREX1-205ENST00000625293 OR10H3O60404 316 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 TPST2O60704 377 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 FAM20BO75063 409 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 NSA2O95478 260 aaKnown RBP18.33■□□□□ 0.53
TREX1-205ENST00000625293 OSMP13725 252 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 HPCAP84074 193 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 ROR2Q01974 943 aaKnown RBP18.33■□□□□ 0.53
TREX1-205ENST00000625293 FOXD4Q12950 439 aaPredicted RBP18.33■□□□□ 0.53
TREX1-205ENST00000625293 ILKQ13418 452 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 NDUFA9Q16795 377 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 GARNL3Q5VVW2 1013 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 NIPAL1Q6NVV3 410 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 PODNL1Q6PEZ8 512 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 NLGN4XQ8N0W4 816 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 CDRT4Q8N9R6 151 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 OR52P1PQ8NH57 321 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 NR4A3Q92570 626 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 COG8Q96MW5 612 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 TGM7Q96PF1 710 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 STACQ99469 402 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 SDF2Q99470 211 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 FNDC11Q9BVV2 318 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 NAA50Q9GZZ1 169 aaKnown RBP18.33■□□□□ 0.53
TREX1-205ENST00000625293 FKBP14Q9NWM8 211 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 CLCA2Q9UQC9 943 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 RNF215Q9Y6U7 377 aa18.33■□□□□ 0.53
TREX1-205ENST00000625293 RIF1Q5UIP0 2472 aaKnown RBP18.33■□□□□ 0.52
TREX1-205ENST00000625293 CCDC163A0A0D9SF12 145 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 FITM1A5D6W6 292 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 RPS4Y1P22090 263 aaKnown RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 ACVR2AP27037 513 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 AFF3P51826 1226 aaKnown RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 GP2P55259 537 aaKnown RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 C21orf59P57076 290 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 IGLV3-21P80748 117 aaPredicted RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 CD300LDQ6UXZ3 194 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 DGAT2L6Q6ZPD8 337 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 LINC00471Q8N535 108 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 ZNF540Q8NDQ6 660 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 GAB3Q8WWW8 586 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 CD180Q99467 661 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 SAP130Q9H0E3 1048 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 NDOR1Q9UHB4 597 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 MKLN1Q9UL63 735 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 ZNF443Q9Y2A4 671 aaPredicted RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 IFT52Q9Y366 437 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 WDR45Q9Y484 360 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 EP300Q09472 2414 aaPredicted RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 TGFBR3LH3BV60 316 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 CBX7O95931 251 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 MT-ND2P03891 347 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 TP53P04637 393 aaPredicted RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 ALOX5P09917 674 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 RNH1P13489 461 aaKnown RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 MLLT3P42568 568 aaPredicted RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 IDH2P48735 452 aaKnown RBP18.32■□□□□ 0.52
TREX1-205ENST00000625293 MASP1P48740 699 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 UGT2B15P54855 530 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 TMBIM6P55061 237 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 SKP1P63208 163 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 MAP4K2Q12851 820 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 DUSP8Q13202 625 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 WDR45BQ5MNZ6 344 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 PRSS48Q7RTY5 328 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 CLIP4Q8N3C7 705 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 DIO2Q92813 273 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 CCDC90BQ9GZT6 254 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 ENAMQ9NRM1 1142 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 HCN3Q9P1Z3 774 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 PSORS1C1Q9UIG5 152 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 SLC6A14Q9UN76 642 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 CLDN16Q9Y5I7 305 aa18.32■□□□□ 0.52
TREX1-205ENST00000625293 BLACEA4D250 179 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 FRS3O43559 492 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 RGS10O43665 173 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 INMTO95050 263 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 ATE1O95260 518 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 GIMD1P0DJR0 217 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 S1PR1P21453 382 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 EXOSC7Q15024 291 aaKnown RBP18.31■□□□□ 0.52
TREX1-205ENST00000625293 AP1ARQ63HQ0 302 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 ZER1Q7Z7L7 766 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 P3H2Q8IVL5 708 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 OR4K5Q8NGD3 323 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 ADAMTS18Q8TE60 1221 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 FKBP10Q96AY3 582 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 ZDHHC12Q96GR4 267 aa18.31■□□□□ 0.52
TREX1-205ENST00000625293 TRIM45Q9H8W5 580 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms