RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 FRKP42685 505 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 RNF4P78317 190 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 DUSP2Q05923 314 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 GAB1Q13480 694 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 PIGGQ5H8A4 983 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 RABL3Q5HYI8 236 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 ANXA8L1Q5VT79 327 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 SLC48A1Q6P1K1 146 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 RPTNQ6XPR3 784 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 SULF2Q8IWU5 870 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 ST13P4Q8IZP2 240 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 ZFP62Q8NB50 900 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 C16orf52Q8NHV5 167 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 ASB15Q8WXK1 588 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 AURKBQ96GD4 344 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 SENP5Q96HI0 755 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 SGCZQ96LD1 299 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 RASL10BQ96S79 203 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 HOPXQ9BPY8 73 aaPredicted RBP11.68□□□□□ -0.54
PNKP-217ENST00000625216 IKZF5Q9H5V7 419 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 SPAG4Q9NPE6 437 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 HPF1Q9NWY4 346 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 TMEM181Q9P2C4 612 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 SLC7A8Q9UHI5 535 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 PCDHB14Q9Y5E9 798 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 NOTCH2Q04721 2471 aa11.68□□□□□ -0.54
PNKP-217ENST00000625216 C15orf38-AP3S2A0A0A6YYH1 394 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 MYOCOSA0A1B0GUC4 107 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 PRORSD1PA6NEY8 169 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ERN1O75460 977 aaKnown RBP11.67□□□□□ -0.54
PNKP-217ENST00000625216 WISP2O76076 250 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 NPPAP01160 153 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 IGKV3-11P04433 115 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 TRPC1P48995 793 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 MEOX1P50221 254 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 MTPNP58546 118 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ID2Q02363 134 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 FOLH1Q04609 750 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ZNF750Q32MQ0 723 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 RUNDC3AQ59EK9 446 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 HIST2H2BCQ6DN03 193 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 NANOGP8Q6NSW7 305 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 OPN5Q6U736 354 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 MDGA2Q7Z553 956 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ARPINQ7Z6K5 226 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ZGRF1Q86YA3 2104 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 OR4N5Q8IXE1 308 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 SLC15A3Q8IY34 581 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ARHGAP24Q8N264 748 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 RNF148Q8N7C7 305 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 OR4A15Q8NGL6 344 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 NUBPLQ8TB37 319 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ZNF721Q8TF20 911 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 CCDC124Q96CT7 223 aaKnown RBP11.67□□□□□ -0.54
PNKP-217ENST00000625216 FBXL20Q96IG2 436 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ANKRD27Q96NW4 1050 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 PANX1Q96RD7 426 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 NANOGQ9H9S0 305 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 TAS2R7Q9NYW3 318 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
PNKP-217ENST00000625216 UTS2RQ9UKP6 389 aa11.67□□□□□ -0.54
PNKP-217ENST00000625216 A0A1W2PRB8 838 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 WWP2O00308 870 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 TFECO14948 347 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 ERAL1O75616 437 aaKnown RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 OR6B1O95007 311 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 SLC35E2P0CK97 266 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 AGAP20933 346 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 CDK9P50750 372 aaKnown RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 HBA1P69905 142 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 C3AR1Q16581 482 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 RNFT1Q5M7Z0 435 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 OR52E8Q6IFG1 317 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 XKRXQ6PP77 449 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 IL20RBQ6UXL0 311 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 RTL4Q6ZR62 310 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 ZNF551Q7Z340 670 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 EID3Q8N140 333 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 C10orf111Q8N326 155 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 FBXW8Q8N3Y1 598 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 ZNF808Q8N4W9 903 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 SLC15A4Q8N697 577 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 ZNF321PQ8N8H1 164 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 GOLM1Q8NBJ4 401 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 FAM156AQ8NDB6 213 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 PSD4Q8NDX1 1056 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 OR8J3Q8NGG0 315 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 GOT1L1Q8NHS2 421 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 PPWD1Q96BP3 646 aaKnown RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 CNRIP1Q96F85 164 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 CCDC120Q96HB5 630 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 PHF12Q96QT6 1004 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 SIRT3Q9NTG7 399 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 CD300AQ9UGN4 299 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 USP22Q9UPT9 525 aa11.66□□□□□ -0.54
PNKP-217ENST00000625216 KLF2Q9Y5W3 355 aaPredicted RBP11.66□□□□□ -0.54
PNKP-217ENST00000625216 OR6C76A6NM76 312 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms