RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 TEX47Q8TBZ9 253 aa11.21□□□□□ -0.62
TP53-227ENST00000622645 OR2A5Q96R48 311 aa11.21□□□□□ -0.62
TP53-227ENST00000622645 KCMF1Q9P0J7 381 aa11.21□□□□□ -0.62
TP53-227ENST00000622645 DIMT1Q9UNQ2 313 aaKnown RBP11.21□□□□□ -0.62
TP53-227ENST00000622645 LIPT1Q9Y234 373 aa11.21□□□□□ -0.62
TP53-227ENST00000622645 PCDHGB6Q9Y5F9 930 aa11.21□□□□□ -0.62
TP53-227ENST00000622645 LRRTM2O43300 516 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ASNA1O43681 348 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 CH25HO95992 272 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 THY1P04216 161 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SLC35G6P0C7Q6 338 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 CCNYL3P0C7X3 344 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 POLR2CP19387 275 aaPredicted RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 GSTM3P21266 225 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 C1DQ13901 141 aaKnown RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 RUNX2Q13950 521 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 NFATC4Q14934 902 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 TRAM2Q15035 370 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 CARTPTQ16568 116 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SPANXN2Q5MJ10 180 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SLC25A30Q5SVS4 291 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 MFSD12Q6NUT3 480 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SHFQ7M4L6 423 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 LRRC25Q8N386 305 aaPredicted RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 OR2A14Q96R47 310 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 TMEM165Q9HC07 324 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SNTG1Q9NSN8 517 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 NDUFB11Q9NX14 153 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 IL20RAQ9UHF4 553 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 UGT2A1Q9Y4X1 527 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 LOC105369274A0A096LPK9 316 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 LOC102723532A0A0G2JNH3 316 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 CENPVL1A0A0U1RR11 272 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 GSAPA4D1B5 854 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 RGS5O15539 181 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 AQP9O43315 295 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 RAB36O95755 333 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 DLGAP3O95886 979 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ACADMP11310 421 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SPNP16150 400 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ENDOUP21128 410 aaKnown RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 CTHP32929 405 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 MAGEA10P43363 369 aaPredicted RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 OMPP47874 163 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 GAS1P54826 345 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 RGS8P57771 180 aaPredicted RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 TNFRSF17Q02223 184 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 MXD1Q05195 221 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ST3GAL3Q11203 375 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 MLLT11Q13015 90 aaPredicted RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 FAM214AQ32MH5 1076 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 CCNJQ5T5M9 372 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SLC30A6Q6NXT4 461 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 KIAA1324Q6UXG2 1013 aaKnown RBP11.2□□□□□ -0.62
TP53-227ENST00000622645 FRRS1Q6ZNA5 592 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 CCDC190Q86UF4 302 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 OR4N4Q8N0Y3 316 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 GNPDA2Q8TDQ7 276 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 PATE1Q8WXA2 126 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 HPS1Q92902 700 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ITPKCQ96DU7 683 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 MRGPRX1Q96LB2 322 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 WDR92Q96MX6 357 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 LMAN2LQ9H0V9 348 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ERVK13-1Q9NX77 482 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 ANKMY1Q9P2S6 941 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 SEC14L4Q9UDX3 406 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 STUB1Q9UNE7 303 aa11.2□□□□□ -0.62
TP53-227ENST00000622645 PLD2O14939 933 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 EIF2S1P05198 315 aaKnown RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 UGT2B7P16662 529 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 NDUFS1P28331 727 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 TNFSF8P32971 234 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 SOX18P35713 384 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 GPR4P46093 362 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 RNF144AP50876 292 aaPredicted RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 KIAA1024LP59773 190 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 TSPAN31Q12999 210 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 TRMT12Q53H54 448 aaKnown RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 TMEM184AQ6ZMB5 413 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 SFTPA2Q8IWL1 248 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 TMEM163Q8TC26 289 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 RNFT2Q96EX2 444 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 CEP19Q96LK0 163 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 SDHCQ99643 169 aaPredicted RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 MCHR1Q99705 422 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 SP140LQ9H930 580 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 C14orf119Q9NWQ9 140 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 CALML5Q9NZT1 146 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 YARS2Q9Y2Z4 477 aaKnown RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 MRPS2Q9Y399 296 aaKnown RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 SPIN1Q9Y657 262 aaPredicted RBP11.19□□□□□ -0.62
TP53-227ENST00000622645 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 OR6C74A6NCV1 312 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 UBXN7O94888 489 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 KCNK2O95069 426 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 GNSP15586 552 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 PRKAR1BP31321 381 aa11.19□□□□□ -0.62
TP53-227ENST00000622645 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.19□□□□□ -0.62
TP53-227ENST00000622645 GPR18Q14330 331 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms