RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 FGF4P08620 206 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 IFI6P09912 130 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 TIMP3P35625 211 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 RPL38P63173 70 aaKnown RBP22.96■■□□□ 1.27
VEGFA-229ENST00000621747 CYP27C1Q4G0S4 372 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 SH2D4BQ5SQS7 431 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 SEM1Q6ZVN7 128 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 LIX1LQ8IVB5 337 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 DDIASQ8IXT1 998 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 OR4N2Q8NGD1 307 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 OR2T11Q8NH01 316 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 GFM2Q969S9 779 aaKnown RBP22.96■■□□□ 1.27
VEGFA-229ENST00000621747 ZNF764Q96H86 408 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-229ENST00000621747 WDYHV1Q96HA8 205 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 OR2B2Q9GZK3 357 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 MCCC2Q9HCC0 563 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 TRAF6Q9Y4K3 522 aa22.96■■□□□ 1.27
VEGFA-229ENST00000621747 FBN2P35556 2912 aa22.95■■□□□ 1.27
VEGFA-229ENST00000621747 LSM1O15116 133 aaKnown RBP22.95■■□□□ 1.26
VEGFA-229ENST00000621747 PSMG1O95456 288 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 SDC1P18827 310 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 ARL13AQ5H913 290 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-229ENST00000621747 DCST1Q5T197 706 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 NSUN5P2Q63ZY6 315 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 RNF138Q8WVD3 245 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 TWIST2Q8WVJ9 160 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 REEP4Q9H6H4 257 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 Q9N2J8 555 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 MRTO4Q9UKD2 239 aaKnown RBP22.95■■□□□ 1.26
VEGFA-229ENST00000621747 APCP25054 2843 aa22.95■■□□□ 1.26
VEGFA-229ENST00000621747 DVL2O14641 736 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 IL2RAP01589 272 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 CYP4B1P13584 511 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 CAPN3P20807 821 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 SRD5A2P31213 254 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 CEACAM8P31997 349 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-229ENST00000621747 GPC1P35052 558 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 SERPINB5P36952 375 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 HSPB3Q12988 150 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 RCAN2Q14206 197 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 DECR1Q16698 335 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 GALNTL6Q49A17 601 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 RFTN2Q52LD8 501 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-229ENST00000621747 ENPP6Q6UWR7 440 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 IFNEQ86WN2 208 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 TNIP2Q8NFZ5 429 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 ZFP28Q8NHY6 868 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 PPCDCQ96CD2 204 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 TSSK3Q96PN8 268 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 TRIB1Q96RU8 372 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 TAS2R10Q9NYW0 307 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 CBLCQ9ULV8 474 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 HCFC1P51610 2035 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 LRBAP50851 2863 aa22.94■■□□□ 1.26
VEGFA-229ENST00000621747 CD8B2A6NJW9 211 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 TTC36A6NLP5 189 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 TMEM233B4DJY2 109 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 AKAP10O43572 662 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 TBX19O60806 448 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 GRK2P25098 689 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 EVI2BP34910 448 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 ASMTP46597 345 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 PSMD4P55036 377 aaKnown RBP22.93■■□□□ 1.26
VEGFA-229ENST00000621747 ANKRD26P1Q6NSI1 321 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 ZBED6CLQ96FA7 236 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-229ENST00000621747 LRRC46Q96FV0 321 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 LMF2Q9BU23 707 aaKnown RBP22.93■■□□□ 1.26
VEGFA-229ENST00000621747 TMEM109Q9BVC6 243 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 CALHM2Q9HA72 323 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 C3orf14Q9HBI5 128 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 SH3BP4Q9P0V3 963 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 ZNF629Q9UEG4 869 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-229ENST00000621747 KCNN3Q9UGI6 736 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.93■■□□□ 1.262e-10■■□□□ 14.1
VEGFA-229ENST00000621747 DKKL1Q9UK85 242 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 FBXL2Q9UKC9 423 aa22.93■■□□□ 1.26
VEGFA-229ENST00000621747 V9GYY5 206 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-229ENST00000621747 CREBBPQ92793 2442 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 KDM4EB2RXH2 506 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-229ENST00000621747 PIP5K1BO14986 540 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 CPN1P15169 458 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 DDX5P17844 614 aaKnown RBP22.92■■□□□ 1.26
VEGFA-229ENST00000621747 BMP5P22003 454 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 GAS1P54826 345 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 GAB1Q13480 694 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 UGT3A2Q3SY77 523 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 AAGABQ6PD74 315 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 ZCCHC23Q6ZST2 131 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 ZNF551Q7Z340 670 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-229ENST00000621747 MREGQ8N565 214 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 OR4K17Q8NGC6 315 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 ZPLD1Q8TCW7 415 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 CIDECQ96AQ7 238 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-229ENST00000621747 ZNF559Q9BR84 538 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 PPP4R1LQ9P1A2 415 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 ABCG2Q9UNQ0 655 aa22.92■■□□□ 1.26
VEGFA-229ENST00000621747 MRPS18CQ9Y3D5 142 aaKnown RBP22.92■■□□□ 1.26
VEGFA-229ENST00000621747 ARHGAP21Q5T5U3 1957 aa22.91■■□□□ 1.26
VEGFA-229ENST00000621747 TMEM114B3SHH9 223 aa22.91■■□□□ 1.26
VEGFA-229ENST00000621747 MAPK1P28482 360 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms