RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 DIRAS3O95661 229 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 TFPTP0C1Z6 253 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 T-ENOLP0DO92 83 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 HOXD8P13378 290 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 CSNK1DP48730 415 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 DNASE1L3Q13609 305 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF404Q494X3 552 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 IER5LQ5T953 404 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC18B1Q6NT16 456 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 ECHDC3Q96DC8 303 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 AIFM2Q9BRQ8 373 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 HINT2Q9BX68 163 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 PITHD1Q9GZP4 211 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 PRSS16Q9NQE7 514 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 KLHL21Q9UJP4 597 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 BAIAP2Q9UQB8 552 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 KCNIP3Q9Y2W7 256 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 OR2AT4A6NND4 320 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 BOLA2-SMG1P6H3BVE0 249 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 KCNK5O95279 499 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 VNN2O95498 520 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 PNMTP11086 282 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 NDUFV2P19404 249 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 RSU1Q15404 277 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 KIAA1614Q5VZ46 1190 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 LINC00696Q6ZRV3 163 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF551Q7Z340 670 aaPredicted RBP9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 TMED4Q7Z7H5 227 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC45A3Q96JT2 553 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 AMDHD1Q96NU7 426 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 CHIAQ9BZP6 476 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 EMC9Q9Y3B6 208 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 SPO11Q9Y5K1 396 aa9.27□□□□□ -0.93
CLTCL1-211ENST00000621271 EGFP01133 1207 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 LCKP06239 509 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC2A2P11168 524 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 UBL4AP11441 157 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 HOXA9P31269 272 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 RBMXP38159 391 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 CTXN1P60606 82 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ANKRD33Q7Z3H0 272 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 TMEM135Q86UB9 458 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF610Q8N9Z0 462 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 OR13C3Q8NGS6 347 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 RDH12Q96NR8 316 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 HAPLN2Q9GZV7 340 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 THSD1Q9NS62 852 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 KDM3BQ7LBC6 1761 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 RAC2P15153 192 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 IFNGR1P15260 489 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 STT3AP46977 705 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 DAP3P51398 398 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 TSTQ16762 297 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF517Q6ZMY9 492 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF765Q7L2R6 523 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ANKK1Q8NFD2 765 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 HDAC2Q92769 488 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 TBC1D20Q96BZ9 403 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ZNF700Q9H0M5 742 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 TRAPPC13A5PLN9 417 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ANKRD30BLA7E2S9 258 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 FAM155AB1AL88 458 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 EEF1E1-BLOC1S5C9J1V9 151 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 EEF1E1O43324 174 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 DNAJB5O75953 348 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 HOXD9P28356 352 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 HTR3AP46098 478 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 OR1D4P47884 311 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 UNC50Q53HI1 259 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 BCL2L15Q5TBC7 163 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 KIAA1211LQ6NV74 962 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 PARM1Q6UWI2 310 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 SCML4Q8N228 414 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 MFSD8Q8NHS3 518 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ELSPBP1Q96BH3 223 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 MYRFLQ96LU7 910 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC35F4A4IF30 521 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC22A31A6NKX4 558 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 FOXD2O60548 495 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 CLIC3O95833 236 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 FCER2P06734 321 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 TPOP07202 933 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 DUSP6Q16828 381 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 FAM205BPQ63HN1 556 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 LEG1Q6P5S2 330 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 TRUB1Q8WWH5 349 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 RAB39BQ96DA2 213 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 FAIMQ9NVQ4 179 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ABRACLQ9P1F3 81 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 ACSL6Q9UKU0 697 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 SH2B3Q9UQQ2 575 aa9.26□□□□□ -0.93
CLTCL1-211ENST00000621271 A6NIZ1 184 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 MT-ND2P03891 347 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 SLC5A2P31639 672 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CSNK1A1P48729 337 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 CLDN8P56748 225 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 FXYD6P3P58550 94 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 RAP1BP61224 184 aa9.25□□□□□ -0.93
CLTCL1-211ENST00000621271 RAP1AP62834 184 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms