RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 TRIM23P36406 574 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 RECQLP46063 649 aaPredicted RBP12.26□□□□□ -0.45
SKP2-209ENST00000620197 WDR45BQ5MNZ6 344 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 ERN2Q76MJ5 926 aaKnown RBP12.26□□□□□ -0.45
SKP2-209ENST00000620197 OR5M3Q8NGP4 307 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 KISS1RQ969F8 398 aaPredicted RBP12.26□□□□□ -0.45
SKP2-209ENST00000620197 GIMAP5Q96F15 307 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 SPATA5L1Q9BVQ7 753 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 ERVMER34-1Q9H9K5 563 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 KCNK12Q9HB15 430 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 FOLH1BQ9HBA9 442 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 PAK6Q9NQU5 681 aaPredicted RBP12.26□□□□□ -0.45
SKP2-209ENST00000620197 MRPL39Q9NYK5 338 aaKnown RBP12.26□□□□□ -0.45
SKP2-209ENST00000620197 COMMD3Q9UBI1 195 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 PLAGL1Q9UM63 463 aa12.26□□□□□ -0.45
SKP2-209ENST00000620197 SMIM30A4D0T7 59 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 LINC00862A6NCI5 91 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 C12orf71A8MTZ7 269 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 APOL3O95236 402 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 LAG3P18627 525 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 HOXD10P28358 340 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 RNF144AP50876 292 aaPredicted RBP12.25□□□□□ -0.45
SKP2-209ENST00000620197 DAB2P98082 770 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 LINC01555Q8NAE3 123 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 HAVCR2Q8TDQ0 301 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 RAD51AP1Q96B01 352 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 RGMAQ96B86 450 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 NUS1Q96E22 293 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 MAP6Q96JE9 813 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 HHIPL1Q96JK4 782 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 CAMK1GQ96NX5 476 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 CITED4Q96RK1 184 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 PPIL3Q9H2H8 161 aaKnown RBP12.25□□□□□ -0.45
SKP2-209ENST00000620197 SLC23A1Q9UHI7 598 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SIRT4Q9Y6E7 314 aaPredicted RBP12.25□□□□□ -0.45
SKP2-209ENST00000620197 KCNE3Q9Y6H6 103 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 ZSCAN5BA6NJL1 495 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SMLR1H3BR10 107 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 HSD17B2P37059 387 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 STAT5AP42229 794 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 AVPR1BP47901 424 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 CTBP2P56545 445 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 FXYD6P3P58550 94 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 GPR176Q14439 515 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SLC36A2Q495M3 483 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 TMEM52BQ4KMG9 183 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 LY6G5CQ5SRR4 150 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 OR4C11Q6IEV9 310 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 HEPHL1Q6MZM0 1159 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 ZNF620Q6ZNG0 422 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SHFQ7M4L6 423 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 PXKQ7Z7A4 578 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 GLRX5Q86SX6 157 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SIRT6Q8N6T7 355 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 NEIL3Q8TAT5 605 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 EXOSC8Q96B26 276 aaKnown RBP12.25□□□□□ -0.45
SKP2-209ENST00000620197 ARRDC3Q96B67 414 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 AIF1LQ9BQI0 150 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 BTBD1Q9H0C5 482 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SLC28A3Q9HAS3 691 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 GALNT9Q9HCQ5 603 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 SLC35C2Q9NQQ7 365 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 DIABLOQ9NR28 239 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 B3GNT2Q9NY97 397 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 NTMQ9P121 344 aa12.25□□□□□ -0.45
SKP2-209ENST00000620197 LRIT2A6NDA9 550 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 PRR19A6NJB7 356 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 CASKO14936 926 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 AKAP8O43823 692 aaKnown RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 LCMT2O60294 686 aaKnown RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 EFCAB14O75071 495 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 CD53P19397 219 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 M6PRP20645 277 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 CCR8P51685 355 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 AP2S1P53680 142 aaPredicted RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 WSCD2Q2TBF2 565 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 TRIQKQ629K1 86 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 C11orf74Q86VG3 221 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 ZFP41Q8N8Y5 198 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 TMIEQ8NEW7 156 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 OR4F15Q8NGB8 312 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 TEX47Q8TBZ9 253 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 AKAP1Q92667 903 aaKnown RBP eCLIP12.24□□□□□ -0.45
SKP2-209ENST00000620197 KCTD12Q96CX2 325 aaKnown RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 TCEAL4Q96EI5 215 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 DPH7Q9BTV6 452 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 SARGQ9BW04 601 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 TDP1Q9NUW8 608 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 HCFC1R1Q9NWW0 138 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 EIF3KQ9UBQ5 218 aaKnown RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 SLC23A2Q9UGH3 650 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 TAC3Q9UHF0 121 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 A0A0A6YYJ9 748 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 LOC102723532A0A0G2JNH3 316 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 GTPBP1O00178 669 aaKnown RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 RFXAPO00287 272 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 ORC5O43913 435 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 CLEC3AO75596 197 aa12.24□□□□□ -0.45
SKP2-209ENST00000620197 CHRM5P08912 532 aaPredicted RBP12.24□□□□□ -0.45
SKP2-209ENST00000620197 ZGLP1P0C6A0 271 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms