RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ZNF169Q14929 603 aaPredicted RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 SEC23BQ15437 767 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 NLRC3Q7RTR2 1065 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 DCLRE1CQ96SD1 692 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 B3GNT4Q9C0J1 378 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 POLR2J3Q9H1A7 115 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 PIGUQ9H490 435 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CXorf56Q9H5V9 222 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 UCKL1Q9NWZ5 548 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 REXO2Q9Y3B8 237 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 hCG_2039718K7EN88 272 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 PSIP1O75475 530 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 JRKO75564 520 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 OPN1SWP03999 348 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CHRM4P08173 479 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 ACADSP16219 412 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 RGRP47804 291 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 OCLNQ16625 522 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 GRHL2Q6ISB3 625 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TMBIM1Q969X1 311 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 SLC46A1Q96NT5 459 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 L2HGDHQ9H9P8 463 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 MYH10P35580 1976 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 PRAMEF33A0A0G2JMD5 474 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 PRAMEF10O60809 474 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 LSSP48449 732 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 KPNB1Q14974 876 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TMEM44Q2T9K0 475 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 SLC34A3Q8N130 599 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 DHRSXQ8N5I4 330 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 GEMIN6Q8WXD5 167 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 RCN3Q96D15 328 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 LCORQ96JN0 433 aaPredicted RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 DPH1Q9BZG8 443 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CUEDC1Q9NWM3 386 aaPredicted RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 MRPL39Q9NYK5 338 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TNS1Q9HBL0 1735 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 FOXO6A8MYZ6 492 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TARM1B6A8C7 271 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF821O75541 412 aaPredicted RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 STAT5AP42229 794 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 OR3A3P47888 321 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 OR3A2P47893 321 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 POU3F4P49335 361 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 EPHA5P54756 1037 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 RPS18P62269 152 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 SH3BP2P78314 561 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CFHR1Q03591 330 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 ABCA11PQ4W5N1 156 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 REEP3Q6NUK4 255 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 JMJD6Q6NYC1 403 aaPredicted RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CDHR3Q6ZTQ4 885 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 GIPC3Q8TF64 312 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF473Q8WTR7 871 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 MICU1Q9BPX6 476 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 UBR3Q6ZT12 1888 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 H0YJX3 145 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 CKMT1AP12532 417 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 MAOAP21397 527 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 HADHBP55084 474 aaKnown RBP10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TBC1D28Q2M2D7 210 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 ALG10BQ5I7T1 473 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TRIQKQ629K1 86 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 FCRL6Q6DN72 434 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 C3P1Q6ZMU1 363 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 TBX5Q99593 518 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 OPA3Q9H6K4 179 aa10.26□□□□□ -0.77
POLR2A-209ENST00000617998 A0A1B0GW55 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF878C9JN71 531 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 IDH3BO43837 385 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4L2P0CJ85 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4L3P0CJ86 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4L4P0CJ87 422 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4L5P0CJ88 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4L6P0CJ89 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4L7P0CJ90 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 PRKCAP17252 672 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 TIMM50Q3ZCQ8 353 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 B3GNT6Q6ZMB0 384 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 SENP5Q96HI0 755 aaPredicted RBP10.25□□□□□ -0.77
POLR2A-209ENST00000617998 ZNF419Q96HQ0 510 aaPredicted RBP10.25□□□□□ -0.77
POLR2A-209ENST00000617998 CCDC28BQ9BUN5 200 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 MARCH4Q9P2E8 410 aaPredicted RBP10.25□□□□□ -0.77
POLR2A-209ENST00000617998 DUX4Q9UBX2 424 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 A0A1W2PPM1 405 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 EIF1BO60739 113 aaKnown RBP10.25□□□□□ -0.77
POLR2A-209ENST00000617998 PDE5AO76074 875 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 SLC35E2BP0CK96 405 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 C4BPBP20851 252 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 TRAM2Q15035 370 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 ELAVL1Q15717 326 aaKnown RBP10.25□□□□□ -0.77
POLR2A-209ENST00000617998 ATG9BQ674R7 924 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 SLC23A3Q6PIS1 610 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 KIF2BQ8N4N8 673 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 MREGQ8N565 214 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 INTS12Q96CB8 462 aaKnown RBP10.25□□□□□ -0.77
POLR2A-209ENST00000617998 FAM173AQ9BQD7 235 aa10.25□□□□□ -0.77
POLR2A-209ENST00000617998 GATA5Q9BWX5 397 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms