RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 FGF4P08620 206 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 IFI6P09912 130 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 TIMP3P35625 211 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 RPL38P63173 70 aaKnown RBP22.96■■□□□ 1.27
VEGFA-227ENST00000615393 CYP27C1Q4G0S4 372 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 SH2D4BQ5SQS7 431 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 SEM1Q6ZVN7 128 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 LIX1LQ8IVB5 337 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 DDIASQ8IXT1 998 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 OR4N2Q8NGD1 307 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 OR2T11Q8NH01 316 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 GFM2Q969S9 779 aaKnown RBP22.96■■□□□ 1.27
VEGFA-227ENST00000615393 ZNF764Q96H86 408 aaPredicted RBP22.96■■□□□ 1.27
VEGFA-227ENST00000615393 WDYHV1Q96HA8 205 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 OR2B2Q9GZK3 357 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 MCCC2Q9HCC0 563 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 TRAF6Q9Y4K3 522 aa22.96■■□□□ 1.27
VEGFA-227ENST00000615393 FBN2P35556 2912 aa22.95■■□□□ 1.27
VEGFA-227ENST00000615393 LSM1O15116 133 aaKnown RBP22.95■■□□□ 1.26
VEGFA-227ENST00000615393 PSMG1O95456 288 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 SDC1P18827 310 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 ARL13AQ5H913 290 aaPredicted RBP22.95■■□□□ 1.26
VEGFA-227ENST00000615393 DCST1Q5T197 706 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 NSUN5P2Q63ZY6 315 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 RNF138Q8WVD3 245 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 TWIST2Q8WVJ9 160 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 REEP4Q9H6H4 257 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 Q9N2J8 555 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 MRTO4Q9UKD2 239 aaKnown RBP22.95■■□□□ 1.26
VEGFA-227ENST00000615393 APCP25054 2843 aa22.95■■□□□ 1.26
VEGFA-227ENST00000615393 DVL2O14641 736 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 IL2RAP01589 272 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 CYP4B1P13584 511 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 CAPN3P20807 821 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 SRD5A2P31213 254 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 CEACAM8P31997 349 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-227ENST00000615393 GPC1P35052 558 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 SERPINB5P36952 375 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 HSPB3Q12988 150 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 RCAN2Q14206 197 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 DECR1Q16698 335 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 GALNTL6Q49A17 601 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 RFTN2Q52LD8 501 aaPredicted RBP22.94■■□□□ 1.26
VEGFA-227ENST00000615393 ENPP6Q6UWR7 440 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 IFNEQ86WN2 208 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 TNIP2Q8NFZ5 429 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 ZFP28Q8NHY6 868 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 PPCDCQ96CD2 204 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 TSSK3Q96PN8 268 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 TRIB1Q96RU8 372 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 TAS2R10Q9NYW0 307 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 CBLCQ9ULV8 474 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 HCFC1P51610 2035 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 LRBAP50851 2863 aa22.94■■□□□ 1.26
VEGFA-227ENST00000615393 CD8B2A6NJW9 211 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 TTC36A6NLP5 189 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 TMEM233B4DJY2 109 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 AKAP10O43572 662 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 TBX19O60806 448 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 GRK2P25098 689 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 EVI2BP34910 448 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 ASMTP46597 345 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 PSMD4P55036 377 aaKnown RBP22.93■■□□□ 1.26
VEGFA-227ENST00000615393 ANKRD26P1Q6NSI1 321 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 ZBED6CLQ96FA7 236 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-227ENST00000615393 LRRC46Q96FV0 321 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 LMF2Q9BU23 707 aaKnown RBP22.93■■□□□ 1.26
VEGFA-227ENST00000615393 TMEM109Q9BVC6 243 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 CALHM2Q9HA72 323 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 C3orf14Q9HBI5 128 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 SH3BP4Q9P0V3 963 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 ZNF629Q9UEG4 869 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-227ENST00000615393 KCNN3Q9UGI6 736 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.93■■□□□ 1.262e-10■■□□□ 14.1
VEGFA-227ENST00000615393 DKKL1Q9UK85 242 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 FBXL2Q9UKC9 423 aa22.93■■□□□ 1.26
VEGFA-227ENST00000615393 V9GYY5 206 aaPredicted RBP22.93■■□□□ 1.26
VEGFA-227ENST00000615393 CREBBPQ92793 2442 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 KDM4EB2RXH2 506 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-227ENST00000615393 PIP5K1BO14986 540 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 CPN1P15169 458 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 DDX5P17844 614 aaKnown RBP22.92■■□□□ 1.26
VEGFA-227ENST00000615393 BMP5P22003 454 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 GAS1P54826 345 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 GAB1Q13480 694 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 UGT3A2Q3SY77 523 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 AAGABQ6PD74 315 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 ZCCHC23Q6ZST2 131 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 ZNF551Q7Z340 670 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-227ENST00000615393 MREGQ8N565 214 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 OR4K17Q8NGC6 315 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 ZPLD1Q8TCW7 415 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 CIDECQ96AQ7 238 aaPredicted RBP22.92■■□□□ 1.26
VEGFA-227ENST00000615393 ZNF559Q9BR84 538 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 PPP4R1LQ9P1A2 415 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 ABCG2Q9UNQ0 655 aa22.92■■□□□ 1.26
VEGFA-227ENST00000615393 MRPS18CQ9Y3D5 142 aaKnown RBP22.92■■□□□ 1.26
VEGFA-227ENST00000615393 ARHGAP21Q5T5U3 1957 aa22.91■■□□□ 1.26
VEGFA-227ENST00000615393 TMEM114B3SHH9 223 aa22.91■■□□□ 1.26
VEGFA-227ENST00000615393 MAPK1P28482 360 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms