RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 K7EQS6 105 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RGS13O14921 159 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CASKO14936 926 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MYL12BO14950 172 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CASC3O15234 703 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TMPRSS11DO60235 418 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GADD45GO95257 159 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CH25HO95992 272 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ANXA11P50995 505 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OLR1P78380 273 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 COX10Q12887 443 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GPR50Q13585 617 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 P2RY14Q15391 338 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MEDAGQ5VYS4 303 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR4N4Q8N0Y3 316 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SPERTQ8NA61 448 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GPR32P1Q8NGA4 272 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NT5CQ8TCD5 201 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 F2RL3Q96RI0 385 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF607Q96SK3 696 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF624Q9P2J8 865 aaPredicted RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GPR52Q9Y2T5 361 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LOC105371267A0A1B0GV96 52 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF780AO75290 641 aaPredicted RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CA3P07451 260 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLC2A2P11168 524 aaPredicted RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NDUFS1P28331 727 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MANFP55145 182 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 EFNB1P98172 346 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FAPQ12884 760 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ANKRD54Q6NXT1 300 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 BHLHB9Q6PI77 547 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZFPM2Q8WW38 1151 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 AMDHD1Q96NU7 426 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TEFMQ96QE5 360 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TMED9Q9BVK6 235 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SPATA5L1Q9BVQ7 753 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SORBS1Q9BX66 1292 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RSPO3Q9BXY4 272 aaPredicted RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RNF121Q9H920 327 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 C2orf92A0A1B0GVN3 265 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SNTNA6NMZ2 147 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SYT5O00445 386 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CDK2AP1O14519 115 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OSMP13725 252 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MYOGP15173 224 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RORCP51449 518 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CRISP1P54107 249 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PRKCDQ05655 676 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NDUFA9Q16795 377 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SLX4IPQ5VYV7 408 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FRMPD2BQ6IN97 320 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF367Q7RTV3 350 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MRGPREQ86SM8 312 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TBC1D19Q8N5T2 526 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GATAD2BQ8WXI9 593 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ST8SIA2Q92186 375 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MS4A6EQ96DS6 147 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 MED30Q96HR3 178 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ANKRD19PQ9H560 264 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CCDC59Q9P031 241 aaKnown RBP10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 P2RX2Q9UBL9 471 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SSR3Q9UNL2 185 aa10.2□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CDH23Q9H251 3354 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SPTBP11277 2137 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A0A0B4J293 547 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HMX3A6NHT5 357 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 B4DXG7 233 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TNFSF14O43557 240 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TLX2O43763 284 aaPredicted RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LCMT2O60294 686 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 LIM2P55344 173 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CDC42P60953 191 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CHRNEQ04844 493 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 PTGES3Q15185 160 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OCLNQ16625 522 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 DUSP7Q16829 419 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TOR2AQ5JU69 321 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TCTN3Q6NUS6 607 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 WDR53Q7Z5U6 358 aaPredicted RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 GALNT6Q8NCL4 622 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 KAT2AQ92830 837 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 FGF11Q92914 225 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 RNF31Q96EP0 1072 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 TTTY10Q9BZA0 68 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SERHL2Q9H4I8 314 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 NDRG2Q9UN36 371 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 A0A0G2JPF8 293 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HNRNPCL3B7ZW38 293 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SIGLEC5O15389 551 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 OR7A10O76100 309 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 HNRNPCL4P0DMR1 293 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 AKR1D1P51857 326 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CTBP2P56545 445 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CSTF1Q05048 431 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SIGLEC14Q08ET2 396 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 SUZ12Q15022 739 aaKnown RBP10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 ZNF79Q15937 498 aa10.19□□□□□ -0.78
SENP3-EIF4A1-201ENST00000614237 CLEC12AQ5QGZ9 265 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms