RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 C1SP09871 688 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CTXN2P0C2S0 81 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GIMD1P0DJR0 217 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SPNP16150 400 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ITGB5P18084 799 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 S1PR1P21453 382 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 PSMB6P28072 239 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 NSFP46459 744 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GZMKP49863 264 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 CXCR4P61073 352 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 HERVK_113P63132 956 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 RING1Q06587 406 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ILF3Q12906 894 aaKnown RBP eCLIP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 BAATQ14032 418 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ELAVL3Q14576 367 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 GRK1Q15835 563 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 DDI2Q5TDH0 399 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ABHD17BQ5VST6 288 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ABHD12BQ7Z5M8 362 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 RNF130Q86XS8 419 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ZNF280BQ86YH2 543 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ARHGEF19Q8IW93 802 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SIRT6Q8N6T7 355 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 NUDT10Q8NFP7 164 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OR2L3Q8NG85 312 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OR13C3Q8NGS6 347 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OR6X1Q8NH79 312 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 OR10J5Q8NHC4 309 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SFT2D1Q8WV19 159 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 C14orf79Q96F83 325 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 NUDT11Q96G61 164 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 KCTD14Q9BQ13 255 aaPredicted RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 PIGQQ9BRB3 760 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 XYLT2Q9H1B5 865 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 NXF3Q9H4D5 531 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 UBTD1Q9HAC8 227 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 ACSS2Q9NR19 701 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 DUSP22Q9NRW4 184 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 RAD18Q9NS91 495 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 TREM2Q9NZC2 230 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 MYEF2Q9P2K5 600 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 MLXQ9UH92 298 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 RASD1Q9Y272 281 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 YBX2Q9Y2T7 364 aaKnown RBP4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 KPTNQ9Y664 436 aa4.72□□□□□ -1.65
SPTBN1-206ENST00000602898 SCN7AQ01118 1682 aa4.71□□□□□ -1.65
SPTBN1-206ENST00000602898 A0A0G2JND7 137 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 C9orf170A2RU37 121 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 RFPL4AA6NLU0 287 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 FAM90A27PA6NNH2 459 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 RFPL4AL1F8VTS6 287 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ZNF213O14771 459 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 STX7O15400 261 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 KLRC4O43908 158 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 UGT2B11O75310 529 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 UGT2B17O75795 530 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 OR4F21O95013 312 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ACSL3O95573 720 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 C1QBP02746 253 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 COX4I1P13073 169 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 EFNA1P20827 205 aaPredicted RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 UBA1P22314 1058 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 GPR143P51810 404 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 UGT2B15P54855 530 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PPP1R8Q12972 351 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 DGUOKQ16854 277 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 OR2B11Q5JQS5 317 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 C6orf136Q5SQH8 315 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MEDAGQ5VYS4 303 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 LIPJQ5W064 366 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MSANTD2Q6P1R3 559 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 METTL7BQ6UX53 244 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TIPARPQ7Z3E1 657 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TRAM1L1Q8N609 369 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 AMER3Q8N944 861 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 OR2L5Q8NG80 312 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 OR6M1Q8NGM8 313 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ZCCHC10Q8TBK6 192 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 DNAJB14Q8TBM8 379 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC7A6Q92536 515 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 KCNJ9Q92806 393 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 RPL3LQ92901 407 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 P2RX5Q93086 422 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SLC25A28Q96A46 364 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PRR11Q96HE9 360 aaPredicted RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SENP8Q96LD8 212 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 OR52B2Q96RD2 323 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PFDN5Q99471 154 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 PDCD10Q9BUL8 212 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 ABHD6Q9BV23 337 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 CEP41Q9BYV8 373 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 WNT10AQ9GZT5 417 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TMEM231Q9H6L2 316 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 SSU72Q9NP77 194 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MAGEL2Q9UJ55 1249 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 FBXL3Q9UKT7 428 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 MGAT4BQ9UQ53 548 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 TCAF1Q9Y4C2 921 aa4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 AFDNP55196 1824 aaKnown RBP4.71□□□□□ -1.66
SPTBN1-206ENST00000602898 A0A087X0T9 212 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms