RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 NPPAP01160 153 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 IGHG3P01860 377 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 IL6P05231 212 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 CD99P14209 185 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 PRPS1L1P21108 318 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 TIA1P31483 386 aaKnown RBP eCLIP12.6□□□□□ -0.39
IRF3-225ENST00000600022 CPOXP36551 454 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 HPCAL1P37235 193 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 RPL3P39023 403 aaKnown RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 RAP1GDS1P52306 607 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 ARFIP1P53367 373 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 WNT3P56703 355 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 RNF4P78317 190 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 ELAVL1Q15717 326 aaKnown RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 DPY19L1Q2PZI1 675 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 TMEM35AQ53FP2 167 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 ZNF595Q8IYB9 648 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 C10orf67Q8IYJ2 551 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 METTL4Q8N3J2 472 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 TMEM132CQ8N3T6 1108 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 OR2L5Q8NG80 312 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 ANKRD9Q96BM1 317 aaPredicted RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 PPWD1Q96BP3 646 aaKnown RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 PRPF18Q99633 342 aaKnown RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 HOPXQ9BPY8 73 aaPredicted RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 ZNF717Q9BY31 904 aaPredicted RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 REXO4Q9GZR2 422 aaKnown RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 OR51B5Q9H339 312 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 RMND5AQ9H871 391 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 PROK2Q9HC23 129 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 DNAJB12Q9NXW2 375 aaKnown RBP12.6□□□□□ -0.39
IRF3-225ENST00000600022 DLGAP4Q9Y2H0 992 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
IRF3-225ENST00000600022 C15orf38-AP3S2A0A0A6YYH1 394 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 C17orf105B2RV13 164 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ANKRD28O15084 1053 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 EEDO75530 441 aaKnown RBP12.59□□□□□ -0.39
IRF3-225ENST00000600022 LRATO95237 230 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 TGFB1P01137 390 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 SDC1P18827 310 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 TNNI3P19429 210 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 S100A3P33764 101 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
IRF3-225ENST00000600022 CLDN8P56748 225 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
IRF3-225ENST00000600022 TGM3Q08188 693 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 NFYCQ13952 458 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 KRTAP21-3Q3LHN1 58 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 VPS26BQ4G0F5 336 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 DEPDC1Q5TB30 811 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 B3GNT6Q6ZMB0 384 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 RTL4Q6ZR62 310 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 COMMD6Q7Z4G1 85 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ARPINQ7Z6K5 226 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 SLC22A16Q86VW1 577 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 FUNDC1Q8IVP5 155 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ULK2Q8IYT8 1036 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 C1orf52Q8N6N3 182 aaKnown RBP12.59□□□□□ -0.39
IRF3-225ENST00000600022 SLC2A12Q8TD20 617 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ZNF721Q8TF20 911 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 STMN2Q93045 179 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 SERINC2Q96SA4 455 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 FAM173AQ9BQD7 235 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 SORBS1Q9BX66 1292 aaKnown RBP12.59□□□□□ -0.39
IRF3-225ENST00000600022 RASSF4Q9H2L5 321 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 IL1RL2Q9HB29 575 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 SPAG4Q9NPE6 437 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ACAD8Q9UKU7 415 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 ATG4BQ9Y4P1 393 aa12.59□□□□□ -0.39
IRF3-225ENST00000600022 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.59□□□□□ -0.39
IRF3-225ENST00000600022 NCKAP5O14513 1909 aa12.58□□□□□ -0.39
IRF3-225ENST00000600022 ABCA4P78363 2273 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 SAP18O00422 153 aaKnown RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 PLPP1O14494 284 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 PCDH7O60245 1069 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 ANXA4P09525 319 aaPredicted RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 FLNAP21333 2647 aaKnown RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 MTTPP55157 894 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 C21orf58P58505 322 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 PSME3P61289 254 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 RAE1P78406 368 aaKnown RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 PTGR1Q14914 329 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 SLC10A1Q14973 349 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 CEBPEQ15744 281 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 TRMT5Q32P41 509 aaKnown RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 TIGD2Q4W5G0 525 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 ARSKQ6UWY0 536 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 LYPD8Q6UX82 237 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 R3HCC1LQ7Z5L2 792 aaKnown RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 GPALPP1Q8IXQ4 340 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 FBXW8Q8N3Y1 598 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 FAM109AQ8N4B1 249 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 MORN4Q8NDC4 146 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 SRFBP1Q8NEF9 429 aaKnown RBP12.58□□□□□ -0.4
IRF3-225ENST00000600022 CDC26Q8NHZ8 85 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 FBXO27Q8NI29 283 aa12.58□□□□□ -0.4
IRF3-225ENST00000600022 RGMAQ96B86 450 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms