RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MAN2A2P49641 1150 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 PNLIPRP2P54317 469 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 PRR5P85299 388 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 SNTA1Q13424 505 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 GAB1Q13480 694 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 DECR1Q16698 335 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 LSM12Q3MHD2 195 aaKnown RBP25.8■■□□□ 1.72
SSBP4-206ENST00000599699 VPS26BQ4G0F5 336 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 ANGPTL8Q6UXH0 198 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 C3P1Q6ZMU1 363 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 CD163Q86VB7 1156 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 DOLPP1Q86YN1 238 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 LRRC34Q8IZ02 419 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 GPR151Q8TDV0 419 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 DYDC1Q8WWB3 177 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 TMEM41AQ96HV5 264 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 GNRHR2Q96P88 292 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 MS4A4EQ96PG1 132 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 QPCTLQ9NXS2 382 aa25.8■■□□□ 1.72
SSBP4-206ENST00000599699 MRTO4Q9UKD2 239 aaKnown RBP25.8■■□□□ 1.72
SSBP4-206ENST00000599699 SPTAN1Q13813 2472 aaKnown RBP25.79■■□□□ 1.72
SSBP4-206ENST00000599699 TRGV5A0A0B4J1U4 118 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 GOLGA8QA0A0J9YX86 632 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 GOLGA8OA6NCC3 632 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 TTC36A6NLP5 189 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 NPIPA2E9PIF3 369 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 GOLGA8NF8WBI6 632 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 NPIPA3F8WFD2 350 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 KLF11O14901 512 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 TRAPPC6AO75865 159 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 C21orf58P58505 322 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 TOMM20Q15388 145 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 SPDYE7PQ495Y7 208 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 TMEM81Q6P7N7 255 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 OR1J4Q8NGS1 313 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 FBXO30Q8TB52 745 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 LRRC8CQ8TDW0 803 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 SLC9A6Q92581 669 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 CCDC120Q96HB5 630 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 WDR55Q9H6Y2 383 aaPredicted RBP25.79■■□□□ 1.72
SSBP4-206ENST00000599699 ZCCHC3Q9NUD5 404 aaKnown RBP25.79■■□□□ 1.72
SSBP4-206ENST00000599699 NTMQ9P121 344 aa25.79■■□□□ 1.72
SSBP4-206ENST00000599699 NINQ8N4C6 2090 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 DIDO1Q9BTC0 2240 aaKnown RBP25.78■■□□□ 1.72
SSBP4-206ENST00000599699 C6orf47O95873 294 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 EPHA3P29320 983 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 TRPC1P48995 793 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 NXNQ6DKJ4 435 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 EID3Q8N140 333 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 CDRT4Q8N9R6 151 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 FAM120BQ96EK7 910 aaKnown RBP25.78■■□□□ 1.72
SSBP4-206ENST00000599699 SIRT3Q9NTG7 399 aaPredicted RBP25.78■■□□□ 1.72
SSBP4-206ENST00000599699 C15orf41Q9Y2V0 281 aa25.78■■□□□ 1.72
SSBP4-206ENST00000599699 SUSD5O60279 629 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 HCN1O60741 890 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 KCNH1O95259 989 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 CYP4B1P13584 511 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 ELAVL4P26378 380 aaKnown RBP25.77■■□□□ 1.72
SSBP4-206ENST00000599699 FNDC7Q5VTL7 733 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 TIGD3Q6B0B8 471 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 OGFOD2Q6N063 350 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 PIK3R3Q92569 461 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 JADE3Q92613 823 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 CHMP6Q96FZ7 201 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 PHF12Q96QT6 1004 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 YIPF4Q9BSR8 244 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 SLC6A15Q9H2J7 730 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 TNFRSF10DQ9UBN6 386 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 ACAD8Q9UKU7 415 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 MEMO1Q9Y316 297 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 DOPEY1Q5JWR5 2465 aa25.77■■□□□ 1.72
SSBP4-206ENST00000599699 SETXQ7Z333 2677 aaKnown RBP25.77■■□□□ 1.72
SSBP4-206ENST00000599699 EXPH5Q8NEV8 1989 aa25.76■■□□□ 1.72
SSBP4-206ENST00000599699 UTP20O75691 2785 aaKnown RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 A0A1B0GVC2 190 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 GXYLT2A0PJZ3 443 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 OR14I1A6ND48 311 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 AQP7O14520 342 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 PTGDSP41222 190 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 CCT3P49368 545 aaKnown RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 PSMD4P55036 377 aaKnown RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 NME5P56597 212 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 OR4F3Q6IEY1 312 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 MFSD12Q6NUT3 480 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 SPATA19Q7Z5L4 167 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 CAMKMTQ7Z624 323 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 OR5M9Q8NGP3 310 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 PIWIL2Q8TC59 973 aaKnown RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 GIMAP5Q96F15 307 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 RMND5BQ96G75 393 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 C16orf58Q96GQ5 468 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 CXorf36Q9H7Y0 433 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 ACKR4Q9NPB9 350 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 PLEKHB1Q9UF11 243 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 MYO7BQ6PIF6 2116 aa25.76■■□□□ 1.71
SSBP4-206ENST00000599699 SPTBN1Q01082 2364 aaKnown RBP25.76■■□□□ 1.71
SSBP4-206ENST00000599699 ZNF407Q9C0G0 2248 aa25.75■■□□□ 1.71
SSBP4-206ENST00000599699 BCKDKO14874 412 aa25.75■■□□□ 1.71
SSBP4-206ENST00000599699 SNPHO15079 494 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms