RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 ST3GAL4Q11206 333 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 ERV3-1Q14264 604 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 ELOCQ15369 112 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 GPR68Q15743 365 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 ARHGAP11BQ3KRB8 267 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 RBM12BQ8IXT5 1001 aaKnown RBP13.5□□□□□ -0.25
VRK3-217ENST00000599538 DIO2Q92813 273 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 HCN3Q9P1Z3 774 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 KCNE5Q9UJ90 142 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 DOLKQ9UPQ8 538 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 CABIN1Q9Y6J0 2220 aa13.5□□□□□ -0.25
VRK3-217ENST00000599538 TMEM265A0A087WTH1 108 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 SYT5O00445 386 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 FOXS1O43638 330 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ENTPD6O75354 484 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 GABARAPO95166 117 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 BCKDHBP21953 392 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 LIPAP38571 399 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 CSNK1EP49674 416 aaKnown RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 TAS2R41P59536 307 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 VBP1P61758 197 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 HPCAP84074 193 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 MLLT1Q03111 559 aaPredicted RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 DUSP8Q13202 625 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PRTGQ2VWP7 1150 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 SLX4IPQ5VYV7 408 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ZC3H14Q6PJT7 736 aaKnown RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 Q7L0L9 218 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PRICKLE2Q7Z3G6 844 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 NKAIN4Q8IVV8 208 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ALOXE3Q9BYJ1 711 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PLA2G12AQ9BZM1 189 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ARMC7Q9H6L4 198 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 CAPN10Q9HC96 672 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 CALML5Q9NZT1 146 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 FBXL21Q9UKT6 434 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ZNF443Q9Y2A4 671 aaPredicted RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 CEP192Q8TEP8 1941 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PLOD3O60568 738 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 MRPS14O60783 128 aaKnown RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 CYP7B1O75881 506 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 SLITRK5O94991 958 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 BCL10O95999 233 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PTHP01270 115 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PROS1P07225 676 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PRKAR1BP31321 381 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 CAPZBP47756 277 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 RAB38P57729 211 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 STARD6P59095 220 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 ENTPD8Q5MY95 495 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 EXOSC6Q5RKV6 272 aaKnown RBP13.49□□□□□ -0.25
VRK3-217ENST00000599538 UBE2UQ5VVX9 321 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 NKAIN2Q5VXU1 208 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 C12orf73Q69YU5 71 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 C1orf94Q6P1W5 598 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 FIGNL1Q6PIW4 674 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ZNF836Q6ZNA1 936 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ZAR1Q86SH2 424 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 KIF18BQ86Y91 864 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 C1orf216Q8TAB5 229 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 NDNFQ8TB73 568 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PIGUQ9H490 435 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ANKHQ9HCJ1 492 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 PRDM9Q9NQV7 894 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 DNAJC27Q9NZQ0 273 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 CNIH4Q9P003 139 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 ENOPH1Q9UHY7 261 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 SPACA6W5XKT8 324 aa13.49□□□□□ -0.25
VRK3-217ENST00000599538 IGHV5-51A0A0C4DH38 117 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 GXYLT2A0PJZ3 443 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 HRKO00198 91 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 PEX12O00623 359 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 PRG2P13727 222 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 PPM1FP49593 454 aaPredicted RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 ST13P50502 369 aaKnown RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 RGS8P57771 180 aaPredicted RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 NCS1P62166 190 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 ACSM5Q6NUN0 579 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 P2RY8Q86VZ1 359 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 STX19Q8N4C7 294 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 METTL27Q8N6F8 245 aaPredicted RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 MYDGFQ969H8 173 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 CTHRC1Q96CG8 243 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 PEX11GQ96HA9 241 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 TGM7Q96PF1 710 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 SLC38A3Q99624 504 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 DSN1Q9H410 356 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 EGLN3Q9H6Z9 239 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 MTHFD2LQ9H903 347 aaPredicted RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 KLHL3Q9UH77 587 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 NDOR1Q9UHB4 597 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 SLC13A4Q9UKG4 626 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 COLQQ9Y215 455 aaPredicted RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 TMEM184BQ9Y519 407 aaPredicted RBP13.48□□□□□ -0.25
VRK3-217ENST00000599538 EML5Q05BV3 1969 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 CBX7O95931 251 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 ADORA3P0DMS8 318 aa13.48□□□□□ -0.25
VRK3-217ENST00000599538 CD36P16671 472 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms