RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 GRK2P25098 689 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 EVI2BP34910 448 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 MC3RP41968 323 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 SLCO1A2P46721 670 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 CCT5P48643 541 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 FOXA1P55317 472 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 GFRA1P56159 465 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 ZNHIT3Q15649 155 aaPredicted RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 CCDC153Q494R4 210 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 FAM153CQ494X1 144 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 OR5M10Q6IEU7 315 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 POMZP3Q6PJE2 187 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 TMEM107Q6UX40 140 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 NPSR1Q6W5P4 371 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 CHMP1BQ7LBR1 199 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 P4HA3Q7Z4N8 544 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 LUZP2Q86TE4 346 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 CDC20BQ86Y33 519 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 GRAMD2AQ8IUY3 354 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 CCDC63Q8NA47 563 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 FAM76AQ8TAV0 307 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 WNT2BQ93097 391 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 C11orf24Q96F05 449 aaPredicted RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 FOXC2Q99958 501 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 YIPF4Q9BSR8 244 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 RBM24Q9BX46 236 aaKnown RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 Q9N2J8 555 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 MYNNQ9NPC7 610 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 RRAGDQ9NQL2 400 aaPredicted RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 DDX18Q9NVP1 670 aaKnown RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 SIRT5Q9NXA8 310 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 FBXL2Q9UKC9 423 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 MRTO4Q9UKD2 239 aaKnown RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 GRID1Q9ULK0 1009 aa8.9□□□□□ -0.98
VRK3-216ENST00000599342 RPH3AQ9Y2J0 694 aaPredicted RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 POLR3HQ9Y535 204 aaPredicted RBP8.9□□□□□ -0.98
VRK3-216ENST00000599342 A0A087WV62 115 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 A0A1W2PPM1 405 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 FAM221AA4D161 298 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 MYO1GB0I1T2 1018 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 G3V2L1 256 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 PLOD2O00469 737 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 UBFD1O14562 309 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 SCO2O43819 266 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 RSL1D1O76021 490 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 RCBTB2O95199 551 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 GOSR1O95249 250 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 DPP4P27487 766 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 STARP49675 285 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 CLK3P49761 638 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 LHX2P50458 406 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 PSMD4P55036 377 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 DIO3P55073 304 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 DSCR4P56555 118 aaPredicted RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 PPP2R2AP63151 447 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 EEF1A1P68104 462 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 PSG6Q00889 435 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 GAB1Q13480 694 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 DAZAP2Q15038 168 aaPredicted RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 DECR1Q16698 335 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 EEF1A1P5Q5VTE0 462 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 RAET1LQ5VY80 246 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 FAM71E1Q6IPT2 247 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 FRMD7Q6ZUT3 714 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 IKBIPQ70UQ0 350 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 GSPT2Q8IYD1 628 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 GCNT2Q8N0V5 402 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 OR4N2Q8NGD1 307 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 MZB1Q8WU39 189 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 UBLCP1Q8WVY7 318 aaPredicted RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 INTS12Q96CB8 462 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 TXLNGYQ9BZA5 131 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 PIGMQ9H3S5 423 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 PPCSQ9HAB8 311 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 SDHAF3Q9NRP4 125 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 JKAMPQ9P055 326 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 CLCF1Q9UBD9 225 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 MID2Q9UJV3 735 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 EMCNQ9ULC0 261 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 ABCG2Q9UNQ0 655 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 PLEKHA6Q9Y2H5 1048 aa8.89□□□□□ -0.99
VRK3-216ENST00000599342 WBP11Q9Y2W2 641 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 MRPS18CQ9Y3D5 142 aaKnown RBP8.89□□□□□ -0.99
VRK3-216ENST00000599342 SMIM23A6NLE4 172 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 UPK1AO00322 258 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 COPEO14579 308 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 PROCP04070 461 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 UROSP10746 265 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 CD99P14209 185 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 ZNF708P17019 499 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 CPOXP36551 454 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 RFX3P48380 749 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 GAS1P54826 345 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 CLDN18P56856 261 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 DNAJB13P59910 316 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 FOXF2Q12947 444 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 STX5Q13190 355 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 GANABQ14697 944 aaKnown RBP8.88□□□□□ -0.99
VRK3-216ENST00000599342 CYP27C1Q4G0S4 372 aa8.88□□□□□ -0.99
VRK3-216ENST00000599342 NOXRED1Q6NXP6 359 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms