RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 EBPLQ9BY08 206 aa11.89□□□□□ -0.51
SCAF1-202ENST00000595242 REXO4Q9GZR2 422 aaKnown RBP11.89□□□□□ -0.51
SCAF1-202ENST00000595242 TP63Q9H3D4 680 aaPredicted RBP11.89□□□□□ -0.51
SCAF1-202ENST00000595242 RPF2Q9H7B2 306 aaKnown RBP11.89□□□□□ -0.51
SCAF1-202ENST00000595242 KAT8Q9H7Z6 458 aaKnown RBP11.89□□□□□ -0.51
SCAF1-202ENST00000595242 MYNNQ9NPC7 610 aa11.89□□□□□ -0.51
SCAF1-202ENST00000595242 C14orf105Q9NVL8 296 aa11.89□□□□□ -0.51
SCAF1-202ENST00000595242 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.89□□□□□ -0.51
SCAF1-202ENST00000595242 BTNL2Q9UIR0 455 aa11.89□□□□□ -0.51
SCAF1-202ENST00000595242 PCDHB14Q9Y5E9 798 aa11.89□□□□□ -0.51
SCAF1-202ENST00000595242 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 IGHV3-20A0A0C4DH32 117 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 PCDH7O60245 1069 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 TBX19O60806 448 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 NEURL1O76050 574 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 SEC24DO94855 1032 aaPredicted RBP11.88□□□□□ -0.51
SCAF1-202ENST00000595242 SCELO95171 688 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 RAF1P04049 648 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 ANXA4P09525 319 aaPredicted RBP11.88□□□□□ -0.51
SCAF1-202ENST00000595242 C8orf89P0DMQ9 161 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF26P17031 533 aaPredicted RBP11.88□□□□□ -0.51
SCAF1-202ENST00000595242 IL1RNP18510 177 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 IL10P22301 178 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 HPCAL1P37235 193 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 CLCN2P51788 898 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 DLX5P56178 289 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 MRPS35P82673 323 aaKnown RBP11.88□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF763Q0D2J5 394 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 GTDC1Q4AE62 458 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 TBCELQ5QJ74 424 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 THEMIS2Q5TEJ8 643 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 PLAG1Q6DJT9 500 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 GLYATQ6IB77 296 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 OR4F3Q6IEY1 312 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 SLC25A25Q6KCM7 469 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 ARSKQ6UWY0 536 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 PAMR1Q6UXH9 720 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 TMIGD1Q6UXZ0 262 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 IKBIPQ70UQ0 350 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 COMMD6Q7Z4G1 85 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 HORMAD2Q8N7B1 307 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 PACRGLQ8N7B6 248 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 ICA1LQ8NDH6 482 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 OR2T12Q8NG77 320 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 LRTOMTQ8WZ04 291 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 NSMCE2Q96MF7 247 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 AIF1LQ9BQI0 150 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 TGIF2Q9GZN2 237 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 VCXQ9H320 206 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 IKZF5Q9H5V7 419 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 C8orf4Q9NR00 106 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 SLC6A13Q9NSD5 602 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 TAC3Q9UHF0 121 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 RAB26Q9ULW5 256 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 CDC14AQ9UNH5 594 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 USP22Q9UPT9 525 aa11.88□□□□□ -0.51
SCAF1-202ENST00000595242 WBP11Q9Y2W2 641 aaKnown RBP11.88□□□□□ -0.51
SCAF1-202ENST00000595242 A0A0J9YVX5 310 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 ELOVL7A1L3X0 281 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 RFXANKO14593 260 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 DENRO43583 198 aaKnown RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 MAN1A2O60476 641 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 COX7A2P14406 83 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 PTX3P26022 381 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 GSTM2P28161 218 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 GSTM5P46439 218 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 CCR8P51685 355 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 GTF2A1P52655 376 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 EFNA3P52797 238 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 NUP107P57740 925 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 SNTB1Q13884 538 aaKnown RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 KEAP1Q14145 624 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 LRRC36Q1X8D7 754 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 INTS11Q5TA45 600 aaKnown RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 ANXA8L1Q5VT79 327 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 FKBP9P1Q75LS8 142 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 IFNEQ86WN2 208 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 MICU2Q8IYU8 434 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 AMER3Q8N944 861 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 OR7A2PQ8NGA2 310 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 METTL21AQ8WXB1 218 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 ZNF764Q96H86 408 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 INPP5KQ9BT40 448 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 DUSP26Q9BV47 211 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 SARGQ9BW04 601 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 SPATA9Q9BWV2 254 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 MS4A8Q9BY19 250 aa11.87□□□□□ -0.51
SCAF1-202ENST00000595242 BHLHE41Q9C0J9 482 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 MKKSQ9NPJ1 570 aaPredicted RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 EXO1Q9UQ84 846 aaKnown RBP11.87□□□□□ -0.51
SCAF1-202ENST00000595242 GABRR3A8MPY1 467 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 RNASET2O00584 256 aaKnown RBP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 CDC40O60508 579 aaKnown RBP eCLIP11.86□□□□□ -0.51
SCAF1-202ENST00000595242 TIPRLO75663 272 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 PRSS23O95084 383 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 LRATO95237 230 aa11.86□□□□□ -0.51
SCAF1-202ENST00000595242 ATE1O95260 518 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms