RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 TFGQ92734 400 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 TDP1Q9NUW8 608 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 CUEDC1Q9NWM3 386 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 GPR52Q9Y2T5 361 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.43□□□□□ -0.42
VRK3-209ENST00000594948 MYO10Q9HD67 2058 aa12.43□□□□□ -0.42
VRK3-209ENST00000594948 SHISA3A0PJX4 238 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 ISM1B1AKI9 464 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 J3QRE1 110 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 K7ESM1 405 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 KPNA3O00505 521 aaPredicted RBP12.42□□□□□ -0.42
VRK3-209ENST00000594948 MAN2B1O00754 1011 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 LRRTM2O43300 516 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 KLF4O43474 513 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 APOL3O95236 402 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 CCR2P41597 374 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 RFX3P48380 749 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 LSM11P83369 360 aaKnown RBP eCLIP12.42□□□□□ -0.42
VRK3-209ENST00000594948 TRAM1Q15629 374 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 PGGHGQ32M88 737 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 TMEM52BQ4KMG9 183 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 ZNF57Q68EA5 555 aaPredicted RBP12.42□□□□□ -0.42
VRK3-209ENST00000594948 HBMQ6B0K9 141 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 VASNQ6EMK4 673 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 ZNF322Q6U7Q0 402 aaPredicted RBP12.42□□□□□ -0.42
VRK3-209ENST00000594948 TMEM107Q6UX40 140 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 TMEM91Q6ZNR0 172 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 GLCCI1Q86VQ1 547 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 ZFP41Q8N8Y5 198 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 TP53I13Q8NBR0 393 aaPredicted RBP12.42□□□□□ -0.42
VRK3-209ENST00000594948 SLC37A3Q8NCC5 494 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 TMIEQ8NEW7 156 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 OR4M1Q8NGD0 313 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 OR5M3Q8NGP4 307 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 OR4Q3Q8NH05 313 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 SPRYD4Q8WW59 207 aaPredicted RBP12.42□□□□□ -0.42
VRK3-209ENST00000594948 BBS4Q96RK4 519 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 MENTQ9BUN1 341 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 TMED9Q9BVK6 235 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.42□□□□□ -0.42
VRK3-209ENST00000594948 PIGUQ9H490 435 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 MTG2Q9H4K7 406 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 CYSLTR2Q9NS75 346 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 MALT1Q9UDY8 824 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 SLC13A4Q9UKG4 626 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 PLAGL1Q9UM63 463 aa12.42□□□□□ -0.42
VRK3-209ENST00000594948 DNMT3AQ9Y6K1 912 aaPredicted RBP12.42□□□□□ -0.42
VRK3-209ENST00000594948 LOC102723532A0A0G2JNH3 316 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 C7orf66A4D0T2 115 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 GTPBP1O00178 669 aaKnown RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 HRO43593 1189 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 C6P13671 934 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 CELP19835 753 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 M6PRP20645 277 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 RBMS1P29558 406 aaKnown RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 PRKAR1BP31321 381 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 NCBP2P52298 156 aaKnown RBP eCLIP12.41□□□□□ -0.42
VRK3-209ENST00000594948 ST8SIA6P61647 398 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 PLA1AQ53H76 456 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ARHGAP15Q53QZ3 475 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ESCO2Q56NI9 601 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ZNF697Q5TEC3 545 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 NDUFAF5Q5TEU4 345 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SDE2Q6IQ49 451 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 RRM2BQ7LG56 351 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SHFQ7M4L6 423 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 AMZ2Q86W34 360 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 GID4Q8IVV7 300 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 C9orf62Q8N4C0 152 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 KREMEN2Q8NCW0 462 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 UCN3Q969E3 161 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 COX14Q96I36 57 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 GPR137Q96N19 417 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 DCLRE1CQ96SD1 692 aaKnown RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 ACAT2Q9BWD1 397 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 PRR14Q9BWN1 585 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 HDHD5Q9BXW7 423 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 LINC00597Q9H2U6 94 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 TBC1D17Q9HA65 648 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SLC28A3Q9HAS3 691 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 EMC7Q9NPA0 242 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SEMA4GQ9NTN9 838 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 EXTL2Q9UBQ6 330 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 RNF215Q9Y6U7 377 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 A0A1W2PPV9 198 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 RNF13O43567 381 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 LZTS3O60299 673 aaPredicted RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 NOS1APO75052 506 aaPredicted RBP12.41□□□□□ -0.42
VRK3-209ENST00000594948 RFPL3O75679 317 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 OR5F1O95221 314 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 CISD3P0C7P0 127 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ELK1P19419 428 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 TRIM23P36406 574 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 TALDO1P37837 337 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 SSR2P43308 183 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 GPR176Q14439 515 aa12.41□□□□□ -0.42
VRK3-209ENST00000594948 ZIC1Q15915 447 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms