RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	FAM71E1	Q6IPT2	247 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	C16orf78	Q8WTQ4	265 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	TMEM19	Q96HH6	336 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	MS4A3	Q96HJ5	214 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	OSGEPL1	Q9H4B0	414 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	ZC4H2	Q9NQZ6	224 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	DLL4	Q9NR61	685 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	A4GNT	Q9UNA3	340 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	KCNMB2	Q9Y691	235 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	CKAP5	Q14008	2032 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	OR2AG2	A6NM03	316 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	EEF1E1	O43324	174 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	SGTA	O43765	313 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	KLHL18	O94889	574 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	IFNA16	P05015	189 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	SULT1A3	P0DMM9	295 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	SULT1A4	P0DMN0	295 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	RPL3	P39023	403 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	RFX3	P48380	749 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	SMS	P52788	366 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	RPS26	P62854	115 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	RIPPLY1	Q0D2K3	151 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	PIN1	Q13526	163 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	EOGT	Q5NDL2	527 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	IDNK	Q5T6J7	187 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	NDUFAF5	Q5TEU4	345 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546		Q6ZVL8	140 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	KRT74	Q7RTS7	529 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	HSD11B1L	Q7Z5J1	315 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	METTL3	Q86U44	580 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	HORMAD2	Q8N7B1	307 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	SRFBP1	Q8NEF9	429 aa	Known RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	ST8SIA4	Q92187	359 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	ZNF354B	Q96LW1	612 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	CDCP1	Q9H5V8	836 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	CXorf36	Q9H7Y0	433 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	ASB6	Q9NWX5	421 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	STOX2	Q9P2F5	926 aa	Predicted RBP	13.59	□□□□□ -0.23
RFX2-222	ENST00000592546	GPR52	Q9Y2T5	361 aa		13.59	□□□□□ -0.23
RFX2-222	ENST00000592546		A0A1W2PRQ8	180 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	TUBAL3	A6NHL2	446 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	NEDD8-MDP1	E9PL57	170 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	DVL2	O14641	736 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	HR	O43593	1189 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	EIF4E	P06730	217 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	UQCRC2	P22695	453 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	KCNJ5	P48544	419 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	SRP9	P49458	86 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	RAB8A	P61006	207 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	LSM11	P83369	360 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	OR4K5	Q8NGD3	323 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	WDR48	Q8TAF3	677 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	SORCS1	Q8WY21	1168 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	LINC00052	Q96N35	136 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	RBCK1	Q9BYM8	510 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	CPEB1	Q9BZB8	566 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	PLA2G12A	Q9BZM1	189 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	LINC00597	Q9H2U6	94 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	MTG2	Q9H4K7	406 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	A4GALT	Q9NPC4	353 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	MYNN	Q9NPC7	610 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	hCG_1807616	A0A1W2PRN6	198 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	CACNB4	O00305	520 aa	Predicted RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	NDUFA2	O43678	99 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	LRG1	P02750	347 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	CSF2RA	P15509	400 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	RBMS1	P29558	406 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	SLC6A11	P48066	632 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	PITPNB	P48739	271 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	TAS2R50	P59544	299 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	CRYZ	Q08257	329 aa	Known RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	ACSM1	Q08AH1	577 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	SLC36A2	Q495M3	483 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	OAF	Q86UD1	273 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	GPR135	Q8IZ08	494 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	OR2A12	Q8NGT7	310 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	OR10Z1	Q8NGY1	313 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	RIT1	Q92963	219 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	REG4	Q9BYZ8	158 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	KIF25	Q9UIL4	384 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546	SCP2D1	Q9UJQ7	156 aa		13.58	□□□□□ -0.24
RFX2-222	ENST00000592546		G3V3Q6	166 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	C8A	P07357	584 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	VSX2	P58304	361 aa	Predicted RBP	13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	UAP1L1	Q3KQV9	507 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	POM121L1P	Q3SYA9	428 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	CCSMST1	Q4G0I0	132 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	HSD17B12	Q53GQ0	312 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	HBM	Q6B0K9	141 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	MED27	Q6P2C8	311 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	BHLHB9	Q6PI77	547 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	CHMP1B	Q7LBR1	199 aa		13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.57	□□□□□ -0.24
RFX2-222	ENST00000592546	POGLUT1	Q8NBL1	392 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms