RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MREGQ8N565 214 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 FAM83FQ8NEG4 500 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 CLHC1Q8NHS4 586 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 AGR3Q8TD06 166 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 CIDECQ96AQ7 238 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 ELP4Q96EB1 424 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 TSSK3Q96PN8 268 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 TREX2Q9BQ50 279 aaPredicted RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 TMEM109Q9BVC6 243 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 PARD6BQ9BYG5 372 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 PRDM14Q9GZV8 571 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 DDX18Q9NVP1 670 aaKnown RBP12.65□□□□□ -0.38
APOC1-208ENST00000592535 BAIAP2L1Q9UHR4 511 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 CAMK2AQ9UQM7 478 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 OR10H1Q9Y4A9 318 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 TRAF6Q9Y4K3 522 aa12.65□□□□□ -0.38
APOC1-208ENST00000592535 PCNX3Q9H6A9 2034 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 DOCK7Q96N67 2140 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 PDPK1O15530 556 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 TYROBPO43914 113 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 CBR3O75828 277 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 CYP4B1P13584 511 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 MSX1P28360 303 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 PNLIPRP2P54317 469 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 PSPHP78330 225 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 HSPB3Q12988 150 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 PLCZ1Q86YW0 608 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 RNF138Q8WVD3 245 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 ABTB1Q969K4 478 aaPredicted RBP12.64□□□□□ -0.39
APOC1-208ENST00000592535 PPCDCQ96CD2 204 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 ZNF764Q96H86 408 aaPredicted RBP12.64□□□□□ -0.39
APOC1-208ENST00000592535 WDYHV1Q96HA8 205 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 OR2B2Q9GZK3 357 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 EML4Q9HC35 981 aaKnown RBP12.64□□□□□ -0.39
APOC1-208ENST00000592535 GIMAP2Q9UG22 337 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 WIF1Q9Y5W5 379 aa12.64□□□□□ -0.39
APOC1-208ENST00000592535 APCP25054 2843 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 FBN2P35556 2912 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 C17orf51A8MQB3 221 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 B4DXG7 233 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 EPPINO95925 133 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 BPGMP07738 259 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 SSTR2P30874 369 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 ETV4P43268 484 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 GAS1P54826 345 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 GAB1Q13480 694 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 PDE7AQ13946 482 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 KRT71Q3SY84 523 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 XKR7Q5GH72 579 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 OR5M10Q6IEU7 315 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 PM20D2Q8IYS1 436 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 NAXEQ8NCW5 288 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 OR14L1PQ8NHC6 308 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 C14orf79Q96F83 325 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 LURAP1Q96LR2 239 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 LMF2Q9BU23 707 aaKnown RBP12.63□□□□□ -0.39
APOC1-208ENST00000592535 Q9N2J8 555 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 FLRT3Q9NZU0 649 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 SH3BP4Q9P0V3 963 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 FBXL2Q9UKC9 423 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 TMED5Q9Y3A6 229 aa12.63□□□□□ -0.39
APOC1-208ENST00000592535 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 CTIFO43310 598 aaKnown RBP12.62□□□□□ -0.39
APOC1-208ENST00000592535 SCO2O43819 266 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 TBX19O60806 448 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 ACTL6AO96019 429 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 IFI6P09912 130 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 BCKDHAP12694 445 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 GRK2P25098 689 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 CEACAM8P31997 349 aaPredicted RBP12.62□□□□□ -0.39
APOC1-208ENST00000592535 GPC1P35052 558 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 SERPINB5P36952 375 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 KRTAP10-9P60411 292 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 MRPS22P82650 360 aaKnown RBP12.62□□□□□ -0.39
APOC1-208ENST00000592535 CYP27C1Q4G0S4 372 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 LACC1Q8IV20 430 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 HOMEZQ8IX15 550 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 OR6Y1Q8NGX8 325 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 C3orf30Q96M34 536 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 TRIB1Q96RU8 372 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 EQTNQ9NQ60 294 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 ZDHHC2Q9UIJ5 367 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 CBLCQ9ULV8 474 aa12.62□□□□□ -0.39
APOC1-208ENST00000592535 GXYLT2A0PJZ3 443 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 HSPB2A8KAH6 182 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 RGS16O15492 202 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 FADS1O60427 444 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 PEX11AO75192 247 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 SKAP2O75563 359 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 PRPS2P11908 318 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 EFNA1P20827 205 aaPredicted RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 TCEA1P23193 301 aaKnown RBP12.61□□□□□ -0.39
APOC1-208ENST00000592535 SRD5A2P31213 254 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 GABRA3P34903 492 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 EVI2BP34910 448 aa12.61□□□□□ -0.39
APOC1-208ENST00000592535 GCKP35557 465 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms