RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 LHX2P50458 406 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 DIO3P55073 304 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 DSCR4P56555 118 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 PPP2R2AP63151 447 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 ZNF763Q0D2J5 394 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 SNTB1Q13884 538 aaKnown RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 TCHHL1Q5QJ38 904 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 DESI1Q6ICB0 168 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 FAM180BQ6P0A1 224 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 PAMR1Q6UXH9 720 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 UHMK1Q8TAS1 419 aaKnown RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 EXOSC8Q96B26 276 aaKnown RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 APIPQ96GX9 242 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 FOLH1BQ9HBA9 442 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 HHATLQ9HCP6 504 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 SDHAF3Q9NRP4 125 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 SENP1Q9P0U3 644 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 PSMC3IPQ9P2W1 217 aaPredicted RBP17.12■□□□□ 0.33
CCDC43-205ENST00000592333 CLCF1Q9UBD9 225 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 ABCG2Q9UNQ0 655 aa17.12■□□□□ 0.33
CCDC43-205ENST00000592333 MAP1AP78559 2803 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 C2orf72A6NCS6 295 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 TTC36A6NLP5 189 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 CLCA1A8K7I4 914 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 MYO1GB0I1T2 1018 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 PLOD2O00469 737 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 HCRTR2O43614 444 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 RAF1P04049 648 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 ANXA4P09525 319 aaPredicted RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 CHN1P15882 459 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 GRK2P25098 689 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 GAS1P54826 345 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 CORO7P57737 925 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 EEFSECP57772 596 aaKnown RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 OCRLQ01968 901 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 GANABQ14697 944 aaKnown RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 OR2A2Q6IF42 318 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 SMPDL3BQ92485 455 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 ZNF592Q92610 1267 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 KAT2AQ92830 837 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 SFXN2Q96NB2 322 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 BBS4Q96RK4 519 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 RBM24Q9BX46 236 aaKnown RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 LIME1Q9H400 295 aa17.11■□□□□ 0.33
CCDC43-205ENST00000592333 MRTO4Q9UKD2 239 aaKnown RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 PRRC2AP48634 2157 aaKnown RBP17.11■□□□□ 0.33
CCDC43-205ENST00000592333 HRNRQ86YZ3 2850 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-205ENST00000592333 ZIC3O60481 467 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 PEPDP12955 493 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 DPP4P27487 766 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 PSMD4P55036 377 aaKnown RBP17.1■□□□□ 0.33
CCDC43-205ENST00000592333 CLDN18P56856 261 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 PSG6Q00889 435 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 FBXW10Q5XX13 1052 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 NPSR1Q6W5P4 371 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 IKBIPQ70UQ0 350 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 TRIM46Q7Z4K8 759 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 CEP112Q8N8E3 955 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 OR7G2Q8NG99 324 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 G6PC3Q9BUM1 346 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 GSTO2Q9H4Y5 243 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 DKKL1Q9UK85 242 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 FBXL2Q9UKC9 423 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 PACSIN3Q9UKS6 424 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 C19orf53Q9UNZ5 99 aaPredicted RBP17.1■□□□□ 0.33
CCDC43-205ENST00000592333 OR10H1Q9Y4A9 318 aa17.1■□□□□ 0.33
CCDC43-205ENST00000592333 AKAP6Q13023 2319 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 A8MXE2 369 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 MSTNO14793 375 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 KLK2P20151 261 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 CLK3P49761 638 aaKnown RBP17.09■□□□□ 0.33
CCDC43-205ENST00000592333 HTR6P50406 440 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 FOXF2Q12947 444 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 GLYR1Q49A26 553 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-205ENST00000592333 CHMP1BQ7LBR1 199 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 SLC44A2Q8IWA5 706 aaPredicted RBP17.09■□□□□ 0.33
CCDC43-205ENST00000592333 OR2L13Q8N349 312 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 FADS6Q8N9I5 356 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 YIPF4Q9BSR8 244 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 PTGES2Q9H7Z7 377 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 PLEKHF2Q9H8W4 249 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 PPCSQ9HAB8 311 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 MID1IP1Q9NPA3 183 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 MYNNQ9NPC7 610 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 MIEF1Q9NQG6 463 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 NDRG3Q9UGV2 375 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 PLEKHA6Q9Y2H5 1048 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 TIMM22Q9Y584 194 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 ABCA4P78363 2273 aa17.09■□□□□ 0.33
CCDC43-205ENST00000592333 KIAA1549Q9HCM3 1950 aa17.08■□□□□ 0.33
CCDC43-205ENST00000592333 NPIPB8E9PQR5 432 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 GLRA3O75311 464 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 RSL1D1O76021 490 aaKnown RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 PSMG1O95456 288 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 PYGBP11216 843 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 EVI2BP34910 448 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 CPA2P48052 419 aa17.08■□□□□ 0.32
CCDC43-205ENST00000592333 AGFG1P52594 562 aaKnown RBP17.08■□□□□ 0.32
CCDC43-205ENST00000592333 SRYQ05066 204 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms