RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 C19orf53Q9UNZ5 99 aaPredicted RBP14.73□□□□□ -0.05
MBD1-227ENST00000592060 CYR61O00622 381 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 FGF17O60258 216 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 SULT1C4O75897 302 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 PCYT1AP49585 367 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 ID2Q02363 134 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 GINS1Q14691 196 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 PUS10Q3MIT2 529 aaKnown RBP14.72□□□□□ -0.05
MBD1-227ENST00000592060 MANEAQ5SRI9 462 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 ACSM5Q6NUN0 579 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 USP43Q70EL4 1123 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 BCDIN3DQ7Z5W3 292 aaKnown RBP14.72□□□□□ -0.05
MBD1-227ENST00000592060 MRGPREQ86SM8 312 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 GNPDA2Q8TDQ7 276 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 CHPT1Q8WUD6 406 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 SLC9A6Q92581 669 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 ORAI3Q9BRQ5 295 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 TAPBPLQ9BX59 468 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 TSSK6Q9BXA6 273 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 PLA2G12AQ9BZM1 189 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 TRIM45Q9H8W5 580 aaPredicted RBP14.72□□□□□ -0.05
MBD1-227ENST00000592060 TVP23BQ9NYZ1 205 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 MKLN1Q9UL63 735 aa14.72□□□□□ -0.05
MBD1-227ENST00000592060 NDRG2Q9UN36 371 aaKnown RBP14.72□□□□□ -0.05
MBD1-227ENST00000592060 RPL36Q9Y3U8 105 aaKnown RBP14.72□□□□□ -0.05
MBD1-227ENST00000592060 OR5K3A6NET4 321 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 METTL15A6NJ78 407 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 FAM170BA6NMN3 283 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 GALR3O60755 368 aaPredicted RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 NTN1O95631 604 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 ATP1B1P05026 303 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 EIF2S1P05198 315 aaKnown RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 THEGLP0DJG4 465 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 CSTF2P33240 577 aaKnown RBP eCLIP14.71□□□□□ -0.05
MBD1-227ENST00000592060 AVPR1BP47901 424 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 GIPRP48546 466 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 RAB15P59190 212 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 RHAGQ02094 409 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 NCF4Q15080 339 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 TRMT12Q53H54 448 aaKnown RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 RNLSQ5VYX0 342 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 ZNF836Q6ZNA1 936 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 DCDC5Q6ZRR9 648 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 PRICKLE2Q7Z3G6 844 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 TAF8Q7Z7C8 310 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 ATCAYQ86WG3 371 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 MEX3DQ86XN8 651 aaKnown RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 CA13Q8N1Q1 262 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 ZNF655Q8N720 491 aaPredicted RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 CSNK1A1LQ8N752 337 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 OR5T3Q8NGG3 340 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 OPALINQ96PE5 141 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 MGLLQ99685 303 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 ARMC7Q9H6L4 198 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 MTHFD2LQ9H903 347 aaPredicted RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 TBCCD1Q9NVR7 557 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 KLHL28Q9NXS3 571 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 WSB2Q9NYS7 404 aaPredicted RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 NTNG1Q9Y2I2 539 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 WDR45Q9Y484 360 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 SLCO1B1Q9Y6L6 691 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 TRIOBPQ9H2D6 2365 aa14.71□□□□□ -0.05
MBD1-227ENST00000592060 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
MBD1-227ENST00000592060 A0A087WV62 115 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 THY1P04216 161 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 CCNYL3P0C7X3 344 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 RPS4Y1P22090 263 aaKnown RBP14.71□□□□□ -0.06
MBD1-227ENST00000592060 OMPP47874 163 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 RGS8P57771 180 aaPredicted RBP14.71□□□□□ -0.06
MBD1-227ENST00000592060 SHC2P98077 582 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 ST3GAL3Q11203 375 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 TSPAN31Q12999 210 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 MED22Q15528 200 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 SSX1Q16384 188 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 TSTQ16762 297 aaKnown RBP14.71□□□□□ -0.06
MBD1-227ENST00000592060 SYT14P1Q58G82 188 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 ZNF761Q86XN6 746 aaPredicted RBP14.71□□□□□ -0.06
MBD1-227ENST00000592060 TDHQ8IZJ6 230 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 OR8D4Q8NGM9 314 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 TMEM131Q92545 1883 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 TMEM80Q96HE8 168 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 SDF2Q99470 211 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 GPR174Q9BXC1 333 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 ZNF350Q9GZX5 532 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 PIGUQ9H490 435 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 EGLN3Q9H6Z9 239 aa14.71□□□□□ -0.06
MBD1-227ENST00000592060 CENPVL1A0A0U1RR11 272 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 DSCR3O14972 297 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 HCRTR1O43613 425 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 LDB3O75112 727 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 IFI6P09912 130 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 HSMCR30P0CW71 290 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 IFNGR2P38484 337 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 SMSP52788 366 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 EEF1A1P68104 462 aaKnown RBP14.7□□□□□ -0.06
MBD1-227ENST00000592060 HOXC5Q00444 222 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 MGAT2Q10469 447 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 SOWAHCQ53LP3 525 aaPredicted RBP14.7□□□□□ -0.06
MBD1-227ENST00000592060 RASSF6Q6ZTQ3 369 aa14.7□□□□□ -0.06
MBD1-227ENST00000592060 PLEKHM3Q6ZWE6 761 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms