RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 NUP54Q7Z3B4 507 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 SNX32Q86XE0 403 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 RNF130Q86XS8 419 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 BCORP1Q8N888 145 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 TMEM178AQ8NBL3 297 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 PSD4Q8NDX1 1056 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 OR10G3Q8NGC4 313 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 DNAJB8Q8NHS0 232 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 MIPOL1Q8TD10 442 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 ZFP90Q8TF47 636 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 RMND5BQ96G75 393 aaPredicted RBP17.62■□□□□ 0.41
DDX39A-214ENST00000590556 SCMH1Q96GD3 660 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 OR7D2Q96RA2 312 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 ADOQ96SZ5 270 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 CCDC106Q9BWC9 280 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 HES7Q9BYE0 225 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 MYLK2Q9H1R3 596 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 SERHL2Q9H4I8 314 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 GIN1Q9NXP7 522 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 SLAMF8Q9P0V8 285 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 LUZP4Q9P127 313 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 PCDHB14Q9Y5E9 798 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 PCDHGB6Q9Y5F9 930 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 EXPH5Q8NEV8 1989 aa17.62■□□□□ 0.41
DDX39A-214ENST00000590556 LOC100653049A0A140TA62 436 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 OR6C70A6NIJ9 312 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 DUXAA6NLW8 204 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 EIF4E1BA6NMX2 242 aaKnown RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 NME2P1O60361 137 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 TSPAN2O60636 221 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 ABCB7O75027 752 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 KRT34O76011 436 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 C1QCP02747 245 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 NME2P22392 152 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 RFX3P48380 749 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 KHKP50053 298 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 RPP38P78345 283 aaKnown RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 POU6F2P78424 691 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 MRPS22P82650 360 aaKnown RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 CYLC2Q14093 348 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 EFR3AQ14156 821 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 MMEL1Q495T6 779 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 LRIF1Q5T3J3 769 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 TNFAIP8L2Q6P589 184 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 RETREG3Q86VR2 466 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 DPP10Q8N608 796 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 OR5D16Q8NGK9 328 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 PNPT1Q8TCS8 783 aaKnown RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 DIO2Q92813 273 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 CDS1Q92903 461 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 EFHD2Q96C19 240 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 AURKBQ96GD4 344 aaPredicted RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 BTBD2Q9BX70 525 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 OR51I1Q9H343 314 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 TPT1P8Q9HAU6 139 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 SACM1LQ9NTJ5 587 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 MAP10Q9P2G4 905 aa17.61■□□□□ 0.41
DDX39A-214ENST00000590556 RALYQ9UKM9 306 aaKnown RBP17.61■□□□□ 0.41
DDX39A-214ENST00000590556 COL6A6A6NMZ7 2263 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 BBIP1A8MTZ0 92 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 FBP2O00757 339 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 UGT2B11O75310 529 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 DCTN3O75935 186 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 KCNK2O95069 426 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 IL33O95760 270 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 P04436 131 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 CCL3P10147 92 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 HOXB9P17482 250 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 ANXA11P50995 505 aaKnown RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 PNLIPRP2P54317 469 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 PSMD4P55036 377 aaKnown RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 STX5Q13190 355 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 GALNTL5Q7Z4T8 443 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 DHDDSQ86SQ9 333 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 ANKS4BQ8N8V4 417 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 Q8NA96 180 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 CCDC197Q8NCU1 140 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 RP9Q8TA86 221 aaKnown RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 PAQR8Q8TEZ7 354 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 HGDQ93099 445 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 SECISBP2Q96T21 854 aaKnown RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 IL1RL2Q9HB29 575 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 SH2D2AQ9NP31 389 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 CNIH4Q9P003 139 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 ANAPC2Q9UJX6 822 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 KLF13Q9Y2Y9 288 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 PCDHGA10Q9Y5H3 936 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 CHCHD2Q9Y6H1 151 aaPredicted RBP17.6■□□□□ 0.41
DDX39A-214ENST00000590556 KCNE3Q9Y6H6 103 aa17.6■□□□□ 0.41
DDX39A-214ENST00000590556 EML6Q6ZMW3 1958 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 CLIC1O00299 241 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 NDUFAB1O14561 156 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 HS6ST1O60243 411 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 AGR2O95994 175 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 OR12D1P0DN82 309 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 COX4I1P13073 169 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 TXNL4AP83876 142 aaKnown RBP17.59■□□□□ 0.41
DDX39A-214ENST00000590556 NFYCQ13952 458 aa17.59■□□□□ 0.41
DDX39A-214ENST00000590556 COQ5Q5HYK3 327 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms