RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 ABOP16442 354 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 MPIP34949 423 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 MAGEA5P43359 124 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CASP6P55212 293 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 DCAF7P61962 342 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ADORA2A-AS1P86434 159 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CHI3L2Q15782 390 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ZNF385BQ569K4 471 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CT45A2Q5DJT8 189 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 FNDC7Q5VTL7 733 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 BICRALQ6AI39 1079 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ARHGAP11AQ6P4F7 1023 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 TMEM81Q6P7N7 255 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 NPSR1Q6W5P4 371 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 MAMDC2Q7Z304 686 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 DOLPP1Q86YN1 238 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 OR2L13Q8N349 312 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 OR5M3Q8NGP4 307 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 FAM57AQ8TBR7 257 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ITLN2Q8WWU7 325 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 OMA1Q96E52 524 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 TSSK3Q96PN8 268 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 BBS4Q96RK4 519 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 SORT1Q99523 831 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 ANGPTL4Q9BY76 406 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 C20orf27Q9GZN8 174 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 STMN4Q9H169 189 aaPredicted RBP10.27□□□□□ -0.77
SMAD4-211ENST00000590499 DEFB127Q9H1M4 99 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 GLIPR2Q9H4G4 154 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 SH3BGRL2Q9UJC5 107 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 HAO1Q9UJM8 370 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 TRIM33Q9UPN9 1127 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 MEMO1Q9Y316 297 aa10.27□□□□□ -0.77
SMAD4-211ENST00000590499 PKDREJQ9NTG1 2253 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 WDR91A4D1P6 747 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 CDC40O60508 579 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 ERLIN1O75477 346 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 SKAP2O75563 359 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 ENDOUP21128 410 aaKnown RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 NOS3P29474 1203 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 NTSP30990 170 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 PTGS2P35354 604 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 PTGDSP41222 190 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 MC3RP41968 323 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 CASP3P42574 277 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 FRKP42685 505 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 NCBP2P52298 156 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 CORO7P57737 925 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 ABCE1P61221 599 aaKnown RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 KCNJ2P63252 427 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 GALNTL6Q49A17 601 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 EMC4Q5J8M3 183 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 C6orf136Q5SQH8 315 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 HIST2H2BCQ6DN03 193 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 ANKRD26P1Q6NSI1 321 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 MTFR2Q6P444 385 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 TRILQ7L0X0 811 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 SLC34A3Q8N130 599 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 RNF138Q8WVD3 245 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 DIO2Q92813 273 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 GFM2Q969S9 779 aaKnown RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 TLCD1Q96CP7 247 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 ELP4Q96EB1 424 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 SLC35A4Q96G79 324 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 PPP3R2Q96LZ3 170 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 RILPQ96NA2 401 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 DMRTA2Q96SC8 542 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 DOHHQ9BU89 302 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 UBQLN3Q9H347 655 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 REEP4Q9H6H4 257 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 SUCOQ9UBS9 1254 aaKnown RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 BAIAP2L1Q9UHR4 511 aa10.26□□□□□ -0.77
SMAD4-211ENST00000590499 BOKQ9UMX3 212 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 C19orf53Q9UNZ5 99 aaPredicted RBP10.26□□□□□ -0.77
SMAD4-211ENST00000590499 CACNA1DQ01668 2161 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 DCHS2Q6V1P9 2916 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TEX15Q9BXT5 2789 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ATP6AP2A0A1C7CYW4 349 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 OR14I1A6ND48 311 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 OR6C70A6NIJ9 312 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 UPK1AO00322 258 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 AQP7O14520 342 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PRRG2O14669 202 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PDPK1O15530 556 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 AKAP10O43572 662 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 TSPAN2O60636 221 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PEX11AO75192 247 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 COQ9O75208 318 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 UGT2B11O75310 529 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ERN1O75460 977 aaKnown RBP10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ATP6AP2O75787 350 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 PDE9AO76083 593 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 SNX4O95219 450 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 HSPA4LO95757 839 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 MYZAPP0CAP1 466 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 BGNP21810 368 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 GRK2P25098 689 aa10.25□□□□□ -0.77
SMAD4-211ENST00000590499 ASMTP46597 345 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms