RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 HPCAL1P37235 193 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 RPL3P39023 403 aaKnown RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 CDK9P50750 372 aaKnown RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 RPL14P50914 215 aaKnown RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 PNLIPRP2P54317 469 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 PSPHP78330 225 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 PSG6Q00889 435 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 PDCD2Q16342 344 aaPredicted RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 DECR1Q16698 335 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 ZNF630Q2M218 657 aaPredicted RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 CYP27C1Q4G0S4 372 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 EIPR1Q53HC9 387 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 XKR7Q5GH72 579 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 WIPI1Q5MNZ9 446 aaPredicted RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 BEND6Q5SZJ8 279 aaPredicted RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 CPTPQ5TA50 214 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 FNDC7Q5VTL7 733 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 CES4AQ5XG92 561 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 ACAD11Q709F0 780 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 SZRD1Q7Z422 152 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 OR2L13Q8N349 312 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 RPRMLQ8N4K4 120 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 MARVELD2Q8N4S9 558 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 ZNF781Q8N8C0 355 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 NUP43Q8NFH3 380 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 OR7A2PQ8NGA2 310 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 MGARPQ8TDB4 240 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 SLC35A4Q96G79 324 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 PRPF18Q99633 342 aaKnown RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 RUBCNLQ9H714 662 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 Q9N2J8 555 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 CHST11Q9NPF2 352 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 EQTNQ9NQ60 294 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 SPRR3Q9UBC9 169 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 ATP6V1HQ9UI12 483 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 MRTO4Q9UKD2 239 aaKnown RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 CBLCQ9ULV8 474 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 MAPRE3Q9UPY8 281 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.04□□□□□ -0.64
TPM4-212ENST00000590180 C15orf41Q9Y2V0 281 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 SLC6A5Q9Y345 797 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 RAP2CQ9Y3L5 183 aa11.04□□□□□ -0.64
TPM4-212ENST00000590180 A0A1W2PRB8 838 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 SNPHO15079 494 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 HNRNPRO43390 633 aaKnown RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 WDR1O75083 606 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 CBR3O75828 277 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 HPNP05981 417 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 HOXD4P09016 255 aaPredicted RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 LAMP1P11279 417 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 ENDOUP21128 410 aaKnown RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 PTPN6P29350 595 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 GCKP35557 465 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 PTGDSP41222 190 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 NUP107P57740 925 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 PDE7AQ13946 482 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 PTGR1Q14914 329 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 CDSNQ15517 529 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 OR5M10Q6IEU7 315 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 TMEM81Q6P7N7 255 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 B3GNT6Q6ZMB0 384 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 YRDCQ86U90 279 aaKnown RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 CCDC71Q8IV32 467 aaPredicted RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 GPR151Q8TDV0 419 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 ASB5Q8WWX0 329 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 ZNF764Q96H86 408 aaPredicted RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 UBQLN3Q9H347 655 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 SERHLQ9NQF3 203 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 ACSS1Q9NUB1 689 aaPredicted RBP11.03□□□□□ -0.64
TPM4-212ENST00000590180 RNF6Q9Y252 685 aa11.03□□□□□ -0.64
TPM4-212ENST00000590180 GXYLT2A0PJZ3 443 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 TMEM120BA0PK00 339 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 TTC36A6NLP5 189 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 AHRRA9YTQ3 701 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 SCAMP2O15127 329 aaKnown RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 EMC8O43402 210 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 SNUPNO95149 360 aaKnown RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 GLI4P10075 376 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 G6PDP11413 515 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 CYP4B1P13584 511 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 COX6B1P14854 86 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 GABRA1P14867 456 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 BMP7P18075 431 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 CLK3P49761 638 aaKnown RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 PSMD4P55036 377 aaKnown RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 MAGOHP61326 146 aaKnown RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 EMX2Q04743 252 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 BST1Q10588 318 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 MAD2L1Q13257 205 aaPredicted RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 VPS26BQ4G0F5 336 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 PLCZ1Q86YW0 608 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 KRTCAP2Q8N6L1 136 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 WDSUB1Q8N9V3 476 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 FAM83FQ8NEG4 500 aaPredicted RBP11.02□□□□□ -0.65
TPM4-212ENST00000590180 OR14L1PQ8NHC6 308 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 NUDT8Q8WV74 236 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 SLC9A6Q92581 669 aa11.02□□□□□ -0.65
TPM4-212ENST00000590180 ABTB1Q969K4 478 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms