RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 COG4Q9H9E3 785 aa2.7□□□□□ -1.98
SMAD4-207ENST00000589076 POLD4Q9HCU8 107 aa2.7□□□□□ -1.98
SMAD4-207ENST00000589076 YAE1D1Q9NRH1 226 aa2.7□□□□□ -1.98
SMAD4-207ENST00000589076 DCAF13Q9NV06 445 aaKnown RBP2.7□□□□□ -1.98
SMAD4-207ENST00000589076 EPS15L1Q9UBC2 864 aa2.7□□□□□ -1.98
SMAD4-207ENST00000589076 ISY1Q9ULR0 285 aaKnown RBP2.7□□□□□ -1.98
SMAD4-207ENST00000589076 AURKCQ9UQB9 309 aa2.7□□□□□ -1.98
SMAD4-207ENST00000589076 CSAG2Q9Y5P2 127 aa2.7□□□□□ -1.98
SMAD4-207ENST00000589076 A0A087WZY1 265 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 RNF222A6NCQ9 220 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 TRIM49BA6NDI0 452 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 TRABD2BA6NFA1 517 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 LRRTM2O43300 516 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 GPRIN2O60269 458 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 SRPX2O60687 465 aaPredicted RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 SDC3O75056 442 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 KBTBD11O94819 623 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 PRAMEF12O95522 483 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 IGHV3-9P01782 118 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 CA3P07451 260 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 ANXA4P09525 319 aaPredicted RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 FAM200BP0CF97 657 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 FOLR2P14207 255 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 UQCRBP14927 111 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 PVRP15151 417 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 DESP17661 470 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 TSPAN8P19075 237 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 TNNI3P19429 210 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 STK19P49842 368 aaPredicted RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 MICAQ29983 383 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 MS4A13Q5J8X5 152 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 ADAMTSL5Q6ZMM2 481 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 ZNF600Q6ZNG1 722 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 LPCAT2Q7L5N7 544 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 CEACAM19Q7Z692 300 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 SLC22A18ASQ8N1D0 253 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 TEX9Q8N6V9 391 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 SUMF1Q8NBK3 374 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 FNDC8Q8TC99 324 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 TFB1MQ8WVM0 346 aaKnown RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 SELENOMQ8WWX9 145 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 ART4Q93070 314 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 DNAJA3Q96EY1 480 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 ELMO2Q96JJ3 720 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 C1orf147Q96MC9 270 aaPredicted RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 GPA33Q99795 319 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 CCSER1Q9C0I3 900 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 DPH5Q9H2P9 285 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 KAT8Q9H7Z6 458 aaKnown RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 DUS2Q9NX74 493 aaKnown RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 CLEC5AQ9NY25 188 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 ATP6V1HQ9UI12 483 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 FOXJ3Q9UPW0 622 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 CHMP2BQ9UQN3 213 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 EIF3LQ9Y262 564 aaKnown RBP2.69□□□□□ -1.98
SMAD4-207ENST00000589076 KIF3AQ9Y496 699 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 RNF115Q9Y4L5 304 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 U3KQV3 271 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 PARD3Q8TEW0 1356 aa2.69□□□□□ -1.98
SMAD4-207ENST00000589076 CFAP65Q6ZU64 1925 aaKnown RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 WASHC1A8K0Z3 465 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 H0YL77 283 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 K7EPI3 171 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 RTL8CO15255 209 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 CHADO15335 359 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 VENTXO95231 258 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 PIGRP01833 764 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 IGHG3P01860 377 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 H2AFZP0C0S5 128 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 GSTT2P0CG29 244 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 GSTT2BP0CG30 244 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 THRBP10828 461 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 PAICSP22234 425 aaKnown RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 GATA2P23769 480 aaPredicted RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 CYP2F1P24903 491 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 MDH1P40925 334 aaKnown RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 HTR5AP47898 357 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 EMDP50402 254 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 HMGCS2P54868 508 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 NAPAP54920 295 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 ZNF33BQ06732 778 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 EXOSC2Q13868 293 aaKnown RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 RFTN1Q14699 578 aaPredicted RBP2.68□□□□□ -1.98
SMAD4-207ENST00000589076 RAB35Q15286 201 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 LTB4RQ15722 352 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 ZIC1Q15915 447 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 CDKN3Q16667 212 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 PPP1R3AQ16821 1122 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 C15orf32Q32M92 178 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 DCAF4L1Q3SXM0 396 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 ZNF311Q5JNZ3 666 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 TCTEX1D4Q5JR98 221 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 SEL1L2Q5TEA6 688 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 AFTPHQ6ULP2 937 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 BTNL3Q6UXE8 466 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 Q7L0L9 218 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 MARCH9Q86YJ5 346 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 CBWD2Q8IUF1 395 aa2.68□□□□□ -1.98
SMAD4-207ENST00000589076 GCNT2Q8N0V5 402 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms