RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 NPSR1Q6W5P4 371 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 OVCH1Q7RTY7 1134 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 TMEM179BQ7Z7N9 219 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 HMGN2P46Q86SG4 172 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF605Q86T29 641 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 STK32CQ86UX6 486 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 LAPTM4BQ86VI4 370 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 CARM1Q86X55 608 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF619Q8N2I2 560 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 MAGEE2Q8TD90 523 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-205ENST00000588745 PMEPA1Q969W9 287 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 FKBP10Q96AY3 582 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 RMND5BQ96G75 393 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-205ENST00000588745 ART5Q96L15 291 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 LRFN5Q96NI6 719 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 EPYCQ99645 322 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 PIP5K1AQ99755 562 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 OSBPL11Q9BXB4 747 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 ITPAQ9BY32 194 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 STRADBQ9C0K7 418 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 SAP130Q9H0E3 1048 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 QRSL1Q9H0R6 528 aaKnown RBP10.6□□□□□ -0.71
SMAD4-205ENST00000588745 SLC26A1Q9H2B4 701 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 Q9H521 79 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 CACYBPQ9HB71 228 aaKnown RBP10.6□□□□□ -0.71
SMAD4-205ENST00000588745 POLE3Q9NRF9 147 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 USE1Q9NZ43 259 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 MKLN1Q9UL63 735 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 SAMHD1Q9Y3Z3 626 aaKnown RBP10.6□□□□□ -0.71
SMAD4-205ENST00000588745 LOXL2Q9Y4K0 774 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 CLCA3PQ9Y6N3 262 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 ENPP4Q9Y6X5 453 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 U3KQV3 271 aa10.6□□□□□ -0.71
SMAD4-205ENST00000588745 OTOGLQ3ZCN5 2332 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 VSTM2BA6NLU5 285 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 TMX2-CTNND1H3BSU7 103 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 BRINP1O60477 761 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 STX11O75558 287 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 KCNK2O95069 426 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 DDAH2O95865 285 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 EPPINO95925 133 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ALBP02768 609 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 IGKV3-11P04433 115 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ALPLP05186 524 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 HEXBP07686 556 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 GUSBP08236 651 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 RHCEP18577 417 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 AGXTP21549 392 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 RPS4Y1P22090 263 aaKnown RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 TGM1P22735 817 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 HOXD11P31277 338 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 NBL1P41271 181 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ARHGDIAP52565 204 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SLC37A1P57057 533 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 RAB15P59190 212 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 PPP2R2BQ00005 443 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SPIBQ01892 262 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ISXQ2M1V0 245 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 MRPL14Q6P1L8 145 aaKnown RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 FIGNL1Q6PIW4 674 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SHISA6Q6ZSJ9 500 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 LANCL3Q6ZV70 420 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 COMTD1Q86VU5 262 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 VRK2Q86Y07 508 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 PEX5LQ8IYB4 626 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 HS3ST5Q8IZT8 346 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF321PQ8N8H1 164 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 OR4D11Q8NGI4 311 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 OR52P1PQ8NH57 321 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 VANGL1Q8TAA9 524 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SLC2A12Q8TD20 617 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF721Q8TF20 911 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 PMM1Q92871 262 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 DAZLQ92904 295 aaKnown RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 NRBF2Q96F24 287 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 LIN37Q96GY3 246 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SENP5Q96HI0 755 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SPSB2Q99619 263 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 RBM4BQ9BQ04 359 aaKnown RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 RBM4Q9BWF3 364 aaKnown RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 OSBPL10Q9BXB5 764 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 OR8D2Q9GZM6 311 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SOX17Q9H6I2 414 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 MTHFD2LQ9H903 347 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 Q9N2J8 555 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SLC39A1Q9NY26 324 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SMPD3Q9NY59 655 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 KCND3Q9UK17 655 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 CFL2Q9Y281 166 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 ZNF443Q9Y2A4 671 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SLC9A8Q9Y2E8 581 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 IFT52Q9Y366 437 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 FAM32AQ9Y421 112 aaKnown RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 TESMINQ9Y4I5 508 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 PCDHGA1Q9Y5H4 931 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 MAGED1Q9Y5V3 778 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-205ENST00000588745 LYVE1Q9Y5Y7 322 aa10.59□□□□□ -0.71
SMAD4-205ENST00000588745 SEC16AO15027 2179 aa10.58□□□□□ -0.72
SMAD4-205ENST00000588745 AGAP5A6NIR3 686 aa10.58□□□□□ -0.72
SMAD4-205ENST00000588745 IDSB3KWA1 339 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms