RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 TMEM80Q96HE8 168 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 LRR1Q96L50 414 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 MIR1-1HGQ9H1L0 117 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 FBXO34Q9NWN3 711 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 TRNAU1APQ9NX07 287 aaKnown RBP12.96□□□□□ -0.33
CNTD1-204ENST00000588408 GIN1Q9NXP7 522 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 PILRAQ9UKJ1 303 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 NPIPA5A0A0B4J1W7 369 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 NPIPA7E9PJI5 369 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 CCRL2O00421 344 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 CASC3O15234 703 aaKnown RBP12.96□□□□□ -0.33
CNTD1-204ENST00000588408 PIP5K1CO60331 668 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 APBB3O95704 486 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 NPIPA8P0DM63 369 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 CSTF2P33240 577 aaKnown RBP eCLIP12.96□□□□□ -0.33
CNTD1-204ENST00000588408 TGM4P49221 684 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 TUBA1BP68363 451 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 CDK5Q00535 292 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 TUBA1AQ71U36 451 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 SHFQ7M4L6 423 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 C9orf43Q8TAL5 461 aaPredicted RBP12.96□□□□□ -0.33
CNTD1-204ENST00000588408 ADAMTS15Q8TE58 950 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 DIO2Q92813 273 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 MOAP1Q96BY2 351 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.33
CNTD1-204ENST00000588408 ABCB10Q9NRK6 738 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 CD207Q9UJ71 328 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 DAPP1Q9UN19 280 aa12.96□□□□□ -0.33
CNTD1-204ENST00000588408 CAB39Q9Y376 341 aaPredicted RBP12.96□□□□□ -0.33
CNTD1-204ENST00000588408 KRBA1A5PL33 1030 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 FAM170BA6NMN3 283 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 H0YGG7 62 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 CH25HO95992 272 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ACP2P11117 423 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 TGM1P22735 817 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 NDUFS1P28331 727 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ETV5P41161 510 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ETV1P50549 477 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ARF3P61204 181 aaPredicted RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 EFNB1P98172 346 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ALDH6A1Q02252 535 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ENTPD8Q5MY95 495 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 OR52I1Q8NGK6 324 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ASB12Q8WXK4 309 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 DACH2Q96NX9 599 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 TRNT1Q96Q11 434 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 KCNS3Q9BQ31 491 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 CNPPD1Q9BV87 410 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 NXF2Q9GZY0 626 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 MMP27Q9H306 513 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 KLK4Q9Y5K2 254 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 PNMA8CA0A1B0GUJ8 204 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 AGAP5A6NIR3 686 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 KDM1AO60341 852 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 GTF2E2P29084 291 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 GPR4P46093 362 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 ARFIP1P53367 373 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 SLC13A2Q13183 592 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 GNA13Q14344 377 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 KIR2DS3Q14952 304 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 SPHARQ15513 63 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 SNAPC1Q16533 368 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 MAPK14Q16539 360 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 FAM214AQ32MH5 1076 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 TYW3Q6IPR3 259 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 CD300LDQ6UXZ3 194 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 LINC00299Q6ZSB3 139 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 FAM92BQ6ZTR7 304 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 TRIM69Q86WT6 500 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 TRIM48Q8IWZ4 208 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 OR4K14Q8NGD5 310 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 PIK3R3Q92569 461 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 POLDIP3Q9BY77 421 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 SAP130Q9H0E3 1048 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
CNTD1-204ENST00000588408 SCML1Q9UN30 329 aa12.95□□□□□ -0.34
CNTD1-204ENST00000588408 LRRC72A6NJI9 287 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
CNTD1-204ENST00000588408 TBX1O43435 398 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 TNFSF14O43557 240 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 SCG5P05408 212 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 CD79BP40259 229 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 OMPP47874 163 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 GAS1P54826 345 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 RELAQ04206 551 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 C1orf61Q13536 156 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 GPR68Q15743 365 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 OCLNQ16625 522 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 PUS10Q3MIT2 529 aaKnown RBP12.94□□□□□ -0.34
CNTD1-204ENST00000588408 HEPHL1Q6MZM0 1159 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 NIPAL1Q6NVV3 410 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 ZNF730Q6ZMV8 503 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 ZNF836Q6ZNA1 936 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 SLC22A16Q86VW1 577 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 FAM26EQ8N5C1 309 aa12.94□□□□□ -0.34
CNTD1-204ENST00000588408 NANOGP1Q8N7R0 232 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms