RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 PLEKHA6Q9Y2H5 1048 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 RPH3AQ9Y2J0 694 aaPredicted RBP13.02□□□□□ -0.33
VMP1-206ENST00000587945 OR10H1Q9Y4A9 318 aa13.02□□□□□ -0.33
VMP1-206ENST00000587945 ANKRD17O75179 2603 aaKnown RBP13.02□□□□□ -0.33
VMP1-206ENST00000587945 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 TUBAL3A6NHL2 446 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 CLCA1A8K7I4 914 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 MYO1GB0I1T2 1018 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 SCO2O43819 266 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 ZIC3O60481 467 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 GLRA3O75311 464 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 CRCPO75575 148 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 IL18BPO95998 194 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 PROCP04070 461 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 GRK2P25098 689 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 SRD5A2P31213 254 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 PEX19P40855 299 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 LHX2P50458 406 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 PSG6Q00889 435 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 ZNF763Q0D2J5 394 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 ENPP6Q6UWR7 440 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 LUZP2Q86TE4 346 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 GCNT2Q8N0V5 402 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 INTS12Q96CB8 462 aaKnown RBP13.01□□□□□ -0.33
VMP1-206ENST00000587945 GLIPR2Q9H4G4 154 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 JKAMPQ9P055 326 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 FOXD3Q9UJU5 478 aaPredicted RBP13.01□□□□□ -0.33
VMP1-206ENST00000587945 DKKL1Q9UK85 242 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 PTGDR2Q9Y5Y4 395 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 MED12Q93074 2177 aa13.01□□□□□ -0.33
VMP1-206ENST00000587945 KIAA1549Q9HCM3 1950 aa13□□□□□ -0.33
VMP1-206ENST00000587945 PLOD2O00469 737 aa13□□□□□ -0.33
VMP1-206ENST00000587945 PLIN3O60664 434 aa13□□□□□ -0.33
VMP1-206ENST00000587945 COQ9O75208 318 aa13□□□□□ -0.33
VMP1-206ENST00000587945 DPP4P27487 766 aa13□□□□□ -0.33
VMP1-206ENST00000587945 PNLIPRP2P54317 469 aa13□□□□□ -0.33
VMP1-206ENST00000587945 CLDN18P56856 261 aa13□□□□□ -0.33
VMP1-206ENST00000587945 STX5Q13190 355 aa13□□□□□ -0.33
VMP1-206ENST00000587945 CFAP157Q5JU67 520 aa13□□□□□ -0.33
VMP1-206ENST00000587945 AAGABQ6PD74 315 aa13□□□□□ -0.33
VMP1-206ENST00000587945 FRMD7Q6ZUT3 714 aa13□□□□□ -0.33
VMP1-206ENST00000587945 TRIM46Q7Z4K8 759 aa13□□□□□ -0.33
VMP1-206ENST00000587945 ADGRE4PQ86SQ3 457 aa13□□□□□ -0.33
VMP1-206ENST00000587945 KIF18BQ86Y91 864 aa13□□□□□ -0.33
VMP1-206ENST00000587945 OR4K17Q8NGC6 315 aa13□□□□□ -0.33
VMP1-206ENST00000587945 GOT1L1Q8NHS2 421 aaPredicted RBP13□□□□□ -0.33
VMP1-206ENST00000587945 PUM2Q8TB72 1066 aaKnown RBP eCLIP13□□□□□ -0.33
VMP1-206ENST00000587945 RNF138Q8WVD3 245 aa13□□□□□ -0.33
VMP1-206ENST00000587945 NINJ1Q92982 152 aa13□□□□□ -0.33
VMP1-206ENST00000587945 WNT2BQ93097 391 aa13□□□□□ -0.33
VMP1-206ENST00000587945 CCDC126Q96EE4 140 aa13□□□□□ -0.33
VMP1-206ENST00000587945 RMND5BQ96G75 393 aaPredicted RBP13□□□□□ -0.33
VMP1-206ENST00000587945 RBM24Q9BX46 236 aaKnown RBP13□□□□□ -0.33
VMP1-206ENST00000587945 STMN4Q9H169 189 aaPredicted RBP13□□□□□ -0.33
VMP1-206ENST00000587945 DSN1Q9H410 356 aa13□□□□□ -0.33
VMP1-206ENST00000587945 MYNNQ9NPC7 610 aa13□□□□□ -0.33
VMP1-206ENST00000587945 MIEF1Q9NQG6 463 aa13□□□□□ -0.33
VMP1-206ENST00000587945 CLCF1Q9UBD9 225 aa13□□□□□ -0.33
VMP1-206ENST00000587945 ZFHX3Q15911 3703 aa13□□□□□ -0.33
VMP1-206ENST00000587945 AKAP6Q13023 2319 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 A0A087WV62 115 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 UPK1AO00322 258 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 RCBTB2O95199 551 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 TGM6O95932 706 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 EPXP11678 715 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 EVI2BP34910 448 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 GSTM5P46439 218 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 B3GALT5-AS1P59052 145 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 DNAJB13P59910 316 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 GAB1Q13480 694 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 DAZAP2Q15038 168 aaPredicted RBP12.99□□□□□ -0.33
VMP1-206ENST00000587945 FBXW10Q5XX13 1052 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 CLEC6AQ6EIG7 209 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 NOXRED1Q6NXP6 359 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 CCDC63Q8NA47 563 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 UBLCP1Q8WVY7 318 aaPredicted RBP12.99□□□□□ -0.33
VMP1-206ENST00000587945 GFM2Q969S9 779 aaKnown RBP12.99□□□□□ -0.33
VMP1-206ENST00000587945 EGLN2Q96KS0 407 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 AMDHD1Q96NU7 426 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 TM9SF2Q99805 663 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 FOXC2Q99958 501 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 SFXN3Q9BWM7 321 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 RTN4RQ9BZR6 473 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 TAS2R7Q9NYW3 318 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 MED11Q9P086 117 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 PPP4R1LQ9P1A2 415 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 C19orf53Q9UNZ5 99 aaPredicted RBP12.99□□□□□ -0.33
VMP1-206ENST00000587945 CCL27Q9Y4X3 112 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 MTORP42345 2549 aa12.99□□□□□ -0.33
VMP1-206ENST00000587945 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
VMP1-206ENST00000587945 C2CD3Q4AC94 2353 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 FADS1O60427 444 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 DIAPH2O60879 1101 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 RSL1D1O76021 490 aaKnown RBP12.98□□□□□ -0.33
VMP1-206ENST00000587945 CPA3P15088 417 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 ZNF708P17019 499 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 DNASE1P24855 282 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 NTSP30990 170 aa12.98□□□□□ -0.33
VMP1-206ENST00000587945 CRHR1P34998 444 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms