RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, human

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERCC1-205	ENST00000587888	CLEC9A	Q6UXN8	241 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	NPSR1	Q6W5P4	371 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	RELL1	Q8IUW5	271 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	P3H2	Q8IVL5	708 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	OR4K17	Q8NGC6	315 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	METTL6	Q8TCB7	284 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	ZNF675	Q8TD23	568 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	C16orf78	Q8WTQ4	265 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	STARD4	Q96DR4	205 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	MTBP	Q96DY7	904 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	DTNBP1	Q96EV8	351 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	PGM2	Q96G03	612 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	BTBD9	Q96Q07	612 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	FUT8	Q9BYC5	575 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	DSN1	Q9H410	356 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	FOLH1B	Q9HBA9	442 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	KLHL28	Q9NXS3	571 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	SENP1	Q9P0U3	644 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	PPP4R1L	Q9P1A2	415 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	OR10H1	Q9Y4A9	318 aa		12.81	□□□□□ -0.36
ERCC1-205	ENST00000587888	HRNR	Q86YZ3	2850 aa	Predicted RBP	12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888		B4DXG7	233 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	MSTN	O14793	375 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	CTAGE8	P0CG41	777 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	HSD3B1	P14060	373 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	TAC1	P20366	129 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	HSD3B2	P26439	372 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	HMOX2	P30519	316 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	GAS1	P54826	345 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	SIRPA	P78324	504 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	CSTF3	Q12996	717 aa	Known RBP	12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	HEPACAM	Q14CZ8	416 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	RASA2	Q15283	850 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	ZNF678	Q5SXM1	525 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	SHE	Q5VZ18	495 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	VWA1	Q6PCB0	445 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	GPRIN3	Q6ZVF9	776 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	BTLA	Q7Z6A9	289 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	CXorf67	Q86X51	503 aa	Predicted RBP	12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	KRTAP1-3	Q8IUG1	177 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	CTAGE4	Q8IX94	777 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	OR7G2	Q8NG99	324 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	OR5M1	Q8NGP8	315 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	SMPDL3B	Q92485	455 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	ERP27	Q96DN0	273 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	PIK3IP1	Q96FE7	263 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	APIP	Q96GX9	242 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	VSTM2L	Q96N03	204 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	C1QTNF3	Q9BXJ4	246 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	EBPL	Q9BY08	206 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	ACPT	Q9BZG2	426 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	SLC35C2	Q9NQQ7	365 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	GIMAP4	Q9NUV9	329 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	TAS2R9	Q9NYW1	312 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	MED11	Q9P086	117 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	TMEM216	Q9P0N5	145 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	DMGDH	Q9UI17	866 aa	Known RBP	12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	TESMIN	Q9Y4I5	508 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	MED12L	Q86YW9	2145 aa		12.8	□□□□□ -0.36
ERCC1-205	ENST00000587888	SLC22A20	A6NK97	555 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888		H0YC42	278 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	ARHGEF9	O43307	516 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	HCRTR2	O43614	444 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	DLX3	O60479	287 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	SNRPA	P09012	282 aa	Known RBP	12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	PEPD	P12955	493 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	HK1	P19367	917 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	MPI	P34949	423 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	TPD52	P55327	224 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	DSCR4	P56555	118 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	B3GALT5-AS1	P59052	145 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	ACSM2A	Q08AH3	577 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	STX5	Q13190	355 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	BCL2A1	Q16548	175 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	ACSM2B	Q68CK6	577 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	OR2A2	Q6IF42	318 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	SAMD14	Q8IZD0	417 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	FAM9C	Q8IZT9	166 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	CDC26	Q8NHZ8	85 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	FIG4	Q92562	907 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	BBS4	Q96RK4	519 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	TSPYL1	Q9H0U9	437 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	ZNF180	Q9UJW8	692 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	ZNF337	Q9Y3M9	751 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	TIMM22	Q9Y584	194 aa		12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888	MAP1A	P78559	2803 aa	Predicted RBP	12.79	□□□□□ -0.36
ERCC1-205	ENST00000587888		A0A087WUV0	522 aa	Predicted RBP	12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	SEC14L5	O43304	696 aa		12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	CTIF	O43310	598 aa	Known RBP	12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	PLOD3	O60568	738 aa		12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	SMPD2	O60906	423 aa		12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	URI1	O94763	535 aa	Predicted RBP	12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	JUN	P05412	331 aa	Known RBP	12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	CRH	P06850	196 aa		12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	ANXA4	P09525	319 aa	Predicted RBP	12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	IMPDH1	P20839	514 aa		12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	EVI2B	P34910	448 aa		12.78	□□□□□ -0.36
ERCC1-205	ENST00000587888	CD79B	P40259	229 aa		12.78	□□□□□ -0.36

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