RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CHST10O43529 356 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 FGF17O60258 216 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 RDH16O75452 317 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 STX11O75558 287 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 OR5F1O95221 314 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 NSA2O95478 260 aaKnown RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 EPPINO95925 133 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 DBIP07108 87 aaKnown RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 CCNYL3P0C7X3 344 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ACP2P11117 423 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PCSK6P29122 969 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ALDH4A1P30038 563 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PTGER1P34995 402 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 AVPR1BP47901 424 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PDX1P52945 283 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 RGS8P57771 180 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 PPP1CAP62136 330 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SNRPGP62308 76 aaKnown RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 MAP4K2Q12851 820 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 DUSP8Q13202 625 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PIN1Q13526 163 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 SEC23BQ15437 767 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 TBCEQ15813 527 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 ZSWIM7Q19AV6 140 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PRICKLE4Q2TBC4 344 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 UBE2UQ5VVX9 321 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 LAIR1Q6GTX8 287 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 TYW3Q6IPR3 259 aaKnown RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 C1orf94Q6P1W5 598 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PODNL1Q6PEZ8 512 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PTCHD4Q6ZW05 846 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PRSS41Q7RTY9 318 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ZNF438Q7Z4V0 828 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 RBM45Q8IUH3 476 aaKnown RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 OR4N5Q8IXE1 308 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 UBALD2Q8IYN6 164 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SIX5Q8N196 739 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ZNF619Q8N2I2 560 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ARHGEF39Q8N4T4 335 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 DEFB119Q8N690 84 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SLC16A11Q8NCK7 471 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SLC7A13Q8TCU3 470 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 DNASE2BQ8WZ79 361 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SGCDQ92629 289 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 CDS1Q92903 461 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ANKRD9Q96BM1 317 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 OTUB1Q96FW1 271 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 ZDHHC12Q96GR4 267 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 CRELD1Q96HD1 420 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 HSPA12BQ96MM6 686 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ZNF578Q96N58 590 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 SIGLEC11Q96RL6 698 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 MAP3K3Q99759 626 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PELOQ9BRX2 385 aaKnown RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 RSPO3Q9BXY4 272 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 ZNF350Q9GZX5 532 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SAP130Q9H0E3 1048 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 FAM60AQ9NP50 221 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 PDE7BQ9NP56 450 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 KRCC1Q9NPI7 259 aaPredicted RBP10.52□□□□□ -0.73
LIG3-204ENST00000585740 MAT2BQ9NZL9 334 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 REV1Q9UBZ9 1251 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 ENPP5Q9UJA9 477 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 SLCO1B1Q9Y6L6 691 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 CSNK1G3Q9Y6M4 447 aa10.52□□□□□ -0.73
LIG3-204ENST00000585740 CLDN4O14493 209 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 OR10H2O60403 315 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 CTNSO60931 367 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 LDB3O75112 727 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 DNAJB6O75190 326 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 SEMA7AO75326 666 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 CYP7B1O75881 506 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 PIAS2O75928 621 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 BCL10O95999 233 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 CDK1P06493 297 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 PIPP12273 146 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 POU2F1P14859 743 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 RPS4Y1P22090 263 aaKnown RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 CXCL12P48061 93 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 PPM1FP49593 454 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 GP2P55259 537 aaKnown RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 SNRPNP63162 240 aaKnown RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 POU6F2P78424 691 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 PIGFQ07326 219 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 TARDBPQ13148 414 aaKnown RBP eCLIP10.51□□□□□ -0.73
LIG3-204ENST00000585740 SMN1Q16637 294 aaKnown RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 DUSP5Q16690 384 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 ENTPD8Q5MY95 495 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 TMEM201Q5SNT2 666 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 C12orf73Q69YU5 71 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 CASP12Q6UXS9 341 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 Q6ZPB1 254 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 PLEKHM3Q6ZWE6 761 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 AHSA2Q719I0 299 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 RRM2BQ7LG56 351 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 RANBP3LQ86VV4 465 aaPredicted RBP10.51□□□□□ -0.73
LIG3-204ENST00000585740 VRK2Q86Y07 508 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 STX19Q8N4C7 294 aa10.51□□□□□ -0.73
LIG3-204ENST00000585740 COX18Q8N8Q8 333 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms