RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 HSPB2A8KAH6 182 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 PIP5K1BO14986 540 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 LSM1O15116 133 aaKnown RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 TSPAN2O60636 221 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 BPGMP07738 259 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 IFI6P09912 130 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 TACR1P25103 407 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 RPL3P39023 403 aaKnown RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 MANFP55145 182 aaKnown RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 HSPB2Q16082 182 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 PRSS53Q2L4Q9 553 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 VPS26BQ4G0F5 336 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 ATP6AP1LQ52LC2 224 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 RFTN2Q52LD8 501 aaPredicted RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 EIPR1Q53HC9 387 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 NHSL2Q5HYW2 709 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 WIPI1Q5MNZ9 446 aaPredicted RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 VASNQ6EMK4 673 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 NPSR1Q6W5P4 371 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 ZCCHC23Q6ZST2 131 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 CROCCP2Q86T23 111 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 YRDCQ86U90 279 aaKnown RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 PLCZ1Q86YW0 608 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 NUDCD3Q8IVD9 361 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 OR2L13Q8N349 312 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 FAM83FQ8NEG4 500 aaPredicted RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 OR2T11Q8NH01 316 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 OR14L1PQ8NHC6 308 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 CEP70Q8NHQ1 597 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 AGR3Q8TD06 166 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 EFHD2Q96C19 240 aaPredicted RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 MTERF3Q96E29 417 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 ZNF764Q96H86 408 aaPredicted RBP11.3□□□□□ -0.6
SS18-225ENST00000585121 FCRL1Q96LA6 429 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 ENKD1Q9H0I2 346 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 TUBB1Q9H4B7 451 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 SLC24A3Q9HC58 644 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 SERHLQ9NQF3 203 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 SDHAF3Q9NRP4 125 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 CBLCQ9ULV8 474 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 WIF1Q9Y5W5 379 aa11.3□□□□□ -0.6
SS18-225ENST00000585121 A0A0G2JNJ9 132 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 NKX2-6A6NCS4 301 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 TMEM233B4DJY2 109 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 UPK1AO00322 258 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 TBX19O60806 448 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 NME6O75414 186 aaPredicted RBP11.29□□□□□ -0.6
SS18-225ENST00000585121 ACTL6AO96019 429 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 PRPS2P11908 318 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 BCKDHAP12694 445 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 BMP7P18075 431 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 SDC1P18827 310 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 HPCAL1P37235 193 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 PTGDSP41222 190 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 CRYZQ08257 329 aaKnown RBP11.29□□□□□ -0.6
SS18-225ENST00000585121 HSPB3Q12988 150 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 RCAN2Q14206 197 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 SLC25A35Q3KQZ1 300 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 ENPP6Q6UWR7 440 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 LRIG3Q6UXM1 1119 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 LACC1Q8IV20 430 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 CLHC1Q8NHS4 586 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 NTNG2Q96CW9 530 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 LRRC46Q96FV0 321 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 UGT2B28Q9BY64 529 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 Q9UFV3 132 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 BAIAP2L1Q9UHR4 511 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 DKKL1Q9UK85 242 aa11.29□□□□□ -0.6
SS18-225ENST00000585121 CACNA1CQ13936 2221 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 TYROBPO43914 113 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 PEX11AO75192 247 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 SASH3O75995 380 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 TOXO94900 526 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 KCNH1O95259 989 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 EPPINO95925 133 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 IL2RAP01589 272 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 MYZAPP0CAP1 466 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 SRD5A2P31213 254 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 PSG6Q00889 435 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 GAB1Q13480 694 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 UGT3A2Q3SY77 523 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 ACSF3Q4G176 576 aaPredicted RBP11.28□□□□□ -0.6
SS18-225ENST00000585121 ANKRD26P1Q6NSI1 321 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
SS18-225ENST00000585121 SZRD1Q7Z422 152 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 WDR53Q7Z5U6 358 aaPredicted RBP11.28□□□□□ -0.6
SS18-225ENST00000585121 OR4K17Q8NGC6 315 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 OR4N2Q8NGD1 307 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
SS18-225ENST00000585121 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 OR2B2Q9GZK3 357 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 EQTNQ9NQ60 294 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 ACSS1Q9NUB1 689 aaPredicted RBP11.28□□□□□ -0.6
SS18-225ENST00000585121 TAS2R10Q9NYW0 307 aa11.28□□□□□ -0.6
SS18-225ENST00000585121 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms