RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	VSTM2L	Q96N03	204 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	TMEM237	Q96Q45	408 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	C1QTNF3	Q9BXJ4	246 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	ACPT	Q9BZG2	426 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	PIGM	Q9H3S5	423 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	GIMAP4	Q9NUV9	329 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	PPP4R1L	Q9P1A2	415 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	EIF3L	Q9Y262	564 aa	Known RBP	13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	OR10H1	Q9Y4A9	318 aa		13.71	□□□□□ -0.21
SREBF1-222	ENST00000583732	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732		A8MXE2	369 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	HCRTR2	O43614	444 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	TNFSF13	O75888	250 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	BCAS2	O75934	225 aa	Predicted RBP	13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	CTAGE8	P0CG41	777 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	HSD3B1	P14060	373 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF708	P17019	499 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	TAC1	P20366	129 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	HSD3B2	P26439	372 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	HOXC12	P31275	282 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	FAM27E3	Q08E93	113 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	GAB1	Q13480	694 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF678	Q5SXM1	525 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	RAET1L	Q5VY80	246 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	VWA1	Q6PCB0	445 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	SCIMP	Q6UWF3	145 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	GPRIN3	Q6ZVF9	776 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	CHMP1B	Q7LBR1	199 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	BIVM	Q86UB2	503 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	CTAGE4	Q8IX94	777 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	FAM9C	Q8IZT9	166 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	TMEM151A	Q8N4L1	468 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	OR7G2	Q8NG99	324 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	METTL6	Q8TCB7	284 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	C16orf78	Q8WTQ4	265 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	DTNBP1	Q96EV8	351 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	C18orf12	Q96KH6	178 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	FAM111A	Q96PZ2	611 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	UCN2	Q96RP3	112 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	KCNA7	Q96RP8	456 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	FMO2	Q99518	471 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	DSN1	Q9H410	356 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	BEX4	Q9NWD9	120 aa	Predicted RBP	13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	KLHL28	Q9NXS3	571 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	NDRG3	Q9UGV2	375 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	DMGDH	Q9UI17	866 aa	Known RBP	13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	TESMIN	Q9Y4I5	508 aa		13.7	□□□□□ -0.22
SREBF1-222	ENST00000583732	SLC22A20	A6NK97	555 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	SEC14L5	O43304	696 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZIC3	O60481	467 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	URI1	O94763	535 aa	Predicted RBP	13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	INHBB	P09529	407 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	HK1	P19367	917 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	CHM	P24386	653 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	TIA1	P31483	386 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	GAS1	P54826	345 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	ACSM2A	Q08AH3	577 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	ACSM2B	Q68CK6	577 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	RELL1	Q8IUW5	271 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	OR5M1	Q8NGP8	315 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	SMPDL3B	Q92485	455 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	PIK3IP1	Q96FE7	263 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	BBS4	Q96RK4	519 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF382	Q96SR6	550 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	SLC35C2	Q9NQQ7	365 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	FLRT3	Q9NZU0	649 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	TMEM216	Q9P0N5	145 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF180	Q9UJW8	692 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732	TIMM22	Q9Y584	194 aa		13.69	□□□□□ -0.22
SREBF1-222	ENST00000583732		A0A087WUV0	522 aa	Predicted RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	EXOC1L	A0A1B0GW35	172 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732		H0YC42	278 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	SIAH2	O43255	324 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	DLX3	O60479	287 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	ULK1	O75385	1050 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	SNRPA	P09012	282 aa	Known RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	EVI2B	P34910	448 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	RFX3	P48380	749 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	PNLIPRP2	P54317	469 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	TPD52	P55327	224 aa	Predicted RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	DSCR4	P56555	118 aa	Predicted RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	B3GALT5-AS1	P59052	145 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	HEPACAM	Q14CZ8	416 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	SPIN4	Q56A73	249 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732		Q5PR19	223 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	CLEC9A	Q6UXN8	241 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	ZNF550	Q7Z398	422 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	CXorf67	Q86X51	503 aa	Predicted RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	P3H2	Q8IVL5	708 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	MEIOB	Q8N635	442 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	GBP7	Q8N8V2	638 aa	Predicted RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	NOA1	Q8NC60	698 aa	Known RBP	13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	FIG4	Q92562	907 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	ERP27	Q96DN0	273 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	STARD4	Q96DR4	205 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	PGM2	Q96G03	612 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	WFIKKN1	Q96NZ8	548 aa		13.68	□□□□□ -0.22
SREBF1-222	ENST00000583732	UBTD1	Q9HAC8	227 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms